Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2230 ATGGGTTCTTTGAATCTGAAGGGACCGGTTGTGATCCCCACTGTTCGTGCCAAAGTAGCAGGGCTCTGCAGTGTTCCTTTAATTGGAGCAATGAAGGCTAAGTGTATTCGAACTGAATTTTGGGGACTCAGGTGTAGCAGAGATAAGGCCACTGTTCTTTCTTTCCATATAAACATGCGAAAGTGCAAGAGCAAGACTGTGCATTGCAGTTTCAACTCACCTTCAAATGGGAGCGGAAGTACGGCTGAGAATTTTGATGAAAAGGATGAAGATTATGTTAACTCTAGCGTGGTTGAAGCTGTTGAGGTGAGGAGTGGAGCAGATGGTTTCATGATCAAAATGAGGGATGGTAGGCACTTAAGATGCATCCATAACAGTCCTCATGGAGGGCTTCTTCCAGATTATGCCCCTCATCCTGCTATTGTGTTGAAGATGGAGGATGGGACTGGTTTACTTCTTCCTATTATTGTTTTGGAGATGCCAAGTGTCTTGCTAATGGCAGCCTTACGCAATGTTCATATAGCTAGACCTACTTTATATCAAGTAGTGAAGGAGATGATTGACAAGATGGGATACGAAGTTAGAGCTGTTAGAGTTACTAAGAGAGTTCATGAGGCATATTTTGCTCAGTTATATATTTCCAAGGTTGGAAATGATTCAGAATGTACGAGCTTTGACCTTCGACCTTCAGATGCTATCAACATTGCTGTGAGATGCAAGGTGCCAATACAAGTCAACAAGTACTTGGCATACAGTGATGGGATGAGAGTAATCGAATCAGGCAAACTATCAACACAGTCCCCTGGTTCAGATGGCCCATTGTTTACTGAACTGGACCGGCCAAGTGGTAAGCCTTGTACTGAAACCAAAGAATTCAATCTTTTGCACAACATGTTGAAAGCTGTTGTTGAAGAGCGCTATCAGGATGCTGCTTTATGGAGGGACAAACTTAATCAACTTAGGGCTGGGAAAAACACAAATAAAAGGAAAAAGATTAATCCGTCGCGGATCAAAGCTTCATTTAAGGGTCTGTCGCTGGCCAATGGATTGTTGTATGCACAAGGCGGAATTTAA 1074 0.4292 MGSLNLKGPVVIPTVRAKVAGLCSVPLIGAMKAKCIRTEFWGLRCSRDKATVLSFHINMRKCKSKTVHCSFNSPSNGSGSTAENFDEKDEDYVNSSVVEAVEVRSGADGFMIKMRDGRHLRCIHNSPHGGLLPDYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAALRNVHIARPTLYQVVKEMIDKMGYEVRAVRVTKRVHEAYFAQLYISKVGNDSECTSFDLRPSDAINIAVRCKVPIQVNKYLAYSDGMRVIESGKLSTQSPGSDGPLFTELDRPSGKPCTETKEFNLLHNMLKAVVEERYQDAALWRDKLNQLRAGKNTNKRKKINPSRIKASFKGLSLANGLLYAQGGI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2230 357 SUPERFAMILY Hypothetical protein TM0160 122 260 IPR036104 GO:0004518
Amo17g2230 357 Gene3D Bifunctional nuclease domain 129 262 IPR036104 GO:0004518
Amo17g2230 357 PANTHER NUCLEASE IN BASAL DEFENSE RESPONSE PROTEIN 6 327 - -
Amo17g2230 357 PANTHER VON HIPPEL-LINDAU PROTEIN 6 327 - -
Amo17g2230 357 Pfam Bifunctional nuclease domain 141 251 IPR003729 GO:0004518
Amo17g2230 357 MobiDBLite consensus disorder prediction 263 283 - -
Amo17g2230 357 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 122 257 IPR003729 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2230 Amo-Chr17 114728907 114732426 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2230 - - gmx:100807950 527.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2230 17 114728907 114732426 Amo17g2230 17 114728907 114732426 ECH