Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2224 ATGGCATTCAGTGCTAAGTATTCCAATTCCAATTTCAATCCAACACACACAAAGACAAAACAGCAGTGTCACAGGGTCACCCTCTTACTTAAACTCCGTTATAACGGTGGCAAACGCCGTCACATACTTCTTCCGTACACCACTCAGAACAACACGAAGAGGAAGCCCCAAATATCAACACTTCACACACCAAAACCCAATTTTCATTTGAAGAGGAGAGTAAGTAGGATTACAATTTCTTGTTGGAAAATTGAGCTGGCTTCTGATTTTCTCTGTAATTTTCCTGGTAAAATATTACACTATCTCTTTATTAGTCTTCATTCAAGTTTGATTGATATTTATGTATGCCAGCGCTTAGCAGTTATCATGGGATCAGCTTGTTGTGTTGCTGCAAAGGATCATACACTTTCCAACAGAGGTGCAGGTGAAAGTTTACATAGAAATGTTGTATGTTCGCCTTCGTGGAGCTTTCGATGGGATAGTTGGGGCCATGTTGCTGGTGAAATTGAGGATCCTTCCTTTCACACGTCACGCAGAGTCAGCAGAAATATCAGCATGGAGCTCAAAGGGTCACTAAGTTCTGAAAGAGGCAATTTATCTGATGGGGGAAGCACCCTGGAGAATTCTGTAACACCTATTTCTCAGAAGTCCCCTGTGCATGAGCGACTGGTCGCAAATCAGATGACCCCATCTTCAAATCTTTCCTTGTCAAGCAATTGCTCTACAGTGGTGAAAAATTTGGCAGAATCACCGGAAATTGCAGAATCTTCAATGCCAAATGTTTCGTATTCAATACCTTCAGTTTTCTCAACACCTACAACCGATCCATTGCCTAATCATAATGATCACAATCTACCTAATTCAATGCCATCGAGATGGGCTCATAGATCTCCAGGACACCCCCTTTTGAGACAAATATCTGACAGCCGAATTCTGGGTCTGAAATCACCGGACAACTCTATTTCTGAGGGAAGACCGTCATTTGTACTCTCCACTTGCAGTAATGACATGGCAACTGGATCCCAATGTGGGTCATCTGATGGCTGGTCTATGCGAACCTTTTCTGAGCTGGTCGCTTCGTCTCAAAAGGAACGGTGGTCTTTTGATAGCGAGTATTTTGGTTCAGGACGTCTTAAGATAAGTGGAGCTAGTAGTAGGTTCTCGTATTCACCCTCAATGGATTTACAATCTTGTGGTGCTTGCTCGAGGCTCTTGACCGAGAGATCTGCATGGGGTAACCAGAAATTTTTTACCAGCAGTGATGTCTCGGTTGTTGCCGTTCTTGTCTGTGGTCATGTATATCATGCAGACTGCTTGGAAACTATGACACCGGAGACAGATAGTTATGATCCAGCCTGTCCAATTTGTATGGTCGGAGAGAAGCACTTGTCGAAGTTATCACGAAAATCAGAGATGAAGGCCAAGAACCACAAGATATCCCGAAACCGGGTTGTTGACAGCTATCTTGATGGTGGGTTAGATGTATTTGATCGCCAAAAAGGGGTTGAATGGGGTGGGAAATCTTCAAAGATGGAAGCCAGCTCCAGTACAAGGAGTAACTCAGTTGGAAAACCATTCTTAAGGCGGCATTTTTCACTCGGATCCAAGTGGAGCCGATCCCTGTCGGAGAATGATTCTGCGAGGAAGAAGGGTTTCTGGGCACGGCATCGTAAAGATTGA 1680 0.4393 MAFSAKYSNSNFNPTHTKTKQQCHRVTLLLKLRYNGGKRRHILLPYTTQNNTKRKPQISTLHTPKPNFHLKRRVSRITISCWKIELASDFLCNFPGKILHYLFISLHSSLIDIYVCQRLAVIMGSACCVAAKDHTLSNRGAGESLHRNVVCSPSWSFRWDSWGHVAGEIEDPSFHTSRRVSRNISMELKGSLSSERGNLSDGGSTLENSVTPISQKSPVHERLVANQMTPSSNLSLSSNCSTVVKNLAESPEIAESSMPNVSYSIPSVFSTPTTDPLPNHNDHNLPNSMPSRWAHRSPGHPLLRQISDSRILGLKSPDNSISEGRPSFVLSTCSNDMATGSQCGSSDGWSMRTFSELVASSQKERWSFDSEYFGSGRLKISGASSRFSYSPSMDLQSCGACSRLLTERSAWGNQKFFTSSDVSVVAVLVCGHVYHADCLETMTPETDSYDPACPICMVGEKHLSKLSRKSEMKAKNHKISRNRVVDSYLDGGLDVFDRQKGVEWGGKSSKMEASSSTRSNSVGKPFLRRHFSLGSKWSRSLSENDSARKKGFWARHRKD* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2224 559 MobiDBLite consensus disorder prediction 538 559 - -
Amo17g2224 559 ProSiteProfiles Zinc finger RING-type profile. 398 456 IPR001841 -
Amo17g2224 559 PANTHER EXPRESSED PROTEIN 123 553 - -
Amo17g2224 559 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 123 553 - -
Amo17g2224 559 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 384 458 IPR013083 -
Amo17g2224 559 SMART ring_2 398 456 IPR001841 -
Amo17g2224 559 SUPERFAMILY RING/U-box 397 457 - -
Amo17g2224 559 MobiDBLite consensus disorder prediction 191 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2224 Amo-Chr17 113660880 113664329 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2224 - - gmx:100793040 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2224 17 113660880 113664329 Amo17g2224 17 113660880 113664329 ECH