Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2222 ATGGCGAAGCATACCCAGGCATGGATGGGAATGCCGAAGAAGAGATGGCCGCTGATGTTAGTGGCATTCTTGTCTCTCTCCACTGCCATGGTTCTCTTCATCAGACCCAACAGCTCCGTTCCCTGCACCCCCACTACCGCCGCCGACAACAACCACTTCGTAGACCAAGACAATCAGATTCGCTCCTCTCTCCAACTCGGAAACGCTCCCTCTCCCCTTGATTTCATGAAGTCCAAGCTCGTTCTCATGGTTTCCCACGAGCTCTCTCTTTCAGGTGGTCCTTTGTTACTGATGGAGTTGGCTTTTCTGCTGAGGGGAGTTGGTGCTGATGTTGTTTGGATGACAAATCAGAAGCCTCCAGAACCTGACCAAGTCATTTACAGTTTGGAGAGCAAGATGTTGGACAGAGGAGTTCAGGTTCTGCCTGCAAAAGGTGAAAAGGCTGTGGATACAGCTATTAAGGCTGATCTAGTCATTCTTAACACTGCTGTAGCCGGCAAGTGGCTTGATGCCGTTCTCAAGGAGAAAGTTTCCCTTGTTCTTCCAAAGGTTTTATGGTGGATTCATGAAATGCGAGGGCATTATTTCAAAGTGGAATATGTTAAGCACCTCCCTTTTGTTGCAGGTGCCATGATTGATTCTCATACTACTGCTGACTACTGGAAGAATAGGACTAGGGAACGTTTAGGCATTAAAATGCCTGAAACTTACGTCGTACATCTTGGAAATAGCAAGGAGCTTATGGATGTTGCAGAAGATAGTGTAGCAAAGAGGGTTCTTCGCGAGCATGTTCGAGAATCTCTTGGAGTGAGAAATGATGATCTACTTTTTGCCATCATAAATAGTGTTTCACGTGGTAAAGGACAGGATCTATTTCTCCGATCCTTTTATGAAAGTTTGCAACTCATACAGGAGAAGAAACTGCAGGTGCCAACTTTGCATGCTGTAGTTGTGGGTAGTGATATGAACGCTCAGACAAAGTTTGAAACTGAGCTGCGCAAATTTGTTGCGGAGAAAAGGATTCAGGACCGTGTTCACTTTGTTAACAAAACCCTGGCAGTGGCTCCTTACTTGGCTTCGATTGATGTTCTTGTTCAAAATTCTCAGGCACGAGGAGAATGTTTTGGAAGGATAACCATTGAAGCAATGGCATTTCGCCTGCCTGTACTGGGAACTGCAGCGGGAGGGACAATGGAGATTGTGGTGAATGGGACAACCGGTTTCCTACACCCTGTTGGAAAAGAAGGCGTGACCCCTCTTGCAAATAACATTGTGAAAATGGCAACTCATGTTGAGAAGAGGTTGACTATGGGGAAGAAAGGGTATGAGAGAGTGAAGGAGAGGTTTCTGGAGCACCATATGGCACAGAGAATCGCACTTGTTCTTAAGGATGTTTTGCAGAAGGCGGCCAGGCAGAATTAA 1422 0.4627 MAKHTQAWMGMPKKRWPLMLVAFLSLSTAMVLFIRPNSSVPCTPTTAADNNHFVDQDNQIRSSLQLGNAPSPLDFMKSKLVLMVSHELSLSGGPLLLMELAFLLRGVGADVVWMTNQKPPEPDQVIYSLESKMLDRGVQVLPAKGEKAVDTAIKADLVILNTAVAGKWLDAVLKEKVSLVLPKVLWWIHEMRGHYFKVEYVKHLPFVAGAMIDSHTTADYWKNRTRERLGIKMPETYVVHLGNSKELMDVAEDSVAKRVLREHVRESLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLQLIQEKKLQVPTLHAVVVGSDMNAQTKFETELRKFVAEKRIQDRVHFVNKTLAVAPYLASIDVLVQNSQARGECFGRITIEAMAFRLPVLGTAAGGTMEIVVNGTTGFLHPVGKEGVTPLANNIVKMATHVEKRLTMGKKGYERVKERFLEHHMAQRIALVLKDVLQKAARQN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2222 473 Gene3D Glycogen Phosphorylase B; 251 449 - -
Amo17g2222 473 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 76 467 - -
Amo17g2222 473 CDD GT4_PimA-like 108 463 - -
Amo17g2222 473 Pfam Glycosyl-transferase family 4 77 256 IPR041693 -
Amo17g2222 473 PANTHER UDP-GLYCOSYLTRANSFERASE SUPERFAMILY PROTEIN 1 471 - -
Amo17g2222 473 PANTHER GLYCOSYLTRANSFERASE 1 471 - -
Amo17g2222 473 Pfam Glycosyl transferases group 1 264 444 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2222 Amo-Chr17 113652770 113655968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2222 40 469 Glycosyltransferase AT1G75420 78.837 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2222 - - gmx:100791337 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2222 17 113652770 113655968 Amo17g2222 17 113652770 113655968 ECH