Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2200 ATGGAATGGAGTAGTGATCTTGTAAGCAACGGTCGCGTGGATGTGCAGGGTAGGATCGCCAACAAGCGAACAACGGGAGGATGGAAGGCGTCACCCTTTATCATAGTGAACGAGGTGGTGGAGAGGTTGGCGTTTTTCGCAGTAGGAGTGAATATGGTGAATTACTTGATTTCAGTAATGCATCAGTCGCTTCCAGACGCAGCTTCGCATTCCTCCCAGTGGGCTGGCGCTGCTTATGTCTTTACGCTTCTCGGAGCCTTCCTTGCTGACGCTTATTTCGGTCGCTTTCGGACTATCCTCATCTTCTCCTCCATCTATGCCCTCGGGATGGTTATGCTGACACTCTTAGCTTCACTAAGCAATCTGCACCCACAGCAACACAAAGAAGCAACCAAAGACCAAAATGCATTCCTGTACGGTGCATTGGCCCTCATTGCACTGGGCACAGGTGGAATCAAGCCATGTGTCTCTTCCTTCGGCGCCGACCAATTCGACGAGGGAGACGACAAAGAAGTTGTACACAAGTCTGCATTCTTCAACTGGTTCTTCTTCGCCATCAACACTGGCGCTCTCTTTGGAATCACTGTACCAGTTTATGTGCAGGAGCAGGTAGGGTGGTCTTGGGGCTTTGGAATACCCACCATCTTCATGTTTTGCTCCATTCTTATCCTACTTCTTGGTGTCCGTTACTACCGTTTTCAAAAACCTATGGGAAGCCCCTTCACTAGGTTTCTACAAGTCATGGTAGCCTCCTTCAGGAACCATCTTAAAGGAGTCAAACTAGGTATTGATACTCCTCTTTATGAGGTACAAACCCCAAACTCTGACATCGTTGGTGCTAGTAAGCTTCCTCACACTCAACAATACAGTTTTCTTGACAAGGCTGCAGTGATAGTGGACCCAGAAGGGACAAACAGAAGAAACAGATGGGAGATATGCACAGTGACACAGGTGGAAGAGTTCAAATCATTCATCAGAGTCCTTCCAGTGTGGGCATCCACCATTGCTCTAGCTCTGACTTATTCTCAACAGTCAACCTTCTTCATAAGCCAAGCAAACATAAGCAACCGAAACCTGAGCAGCAAATTCATTATCCCTGCAGGTTCTGTGCCGGTATTCGCCGCCATCAACGCAGTGATAGTGGTCCCAATCTACGAGAAGTTGGTAGTCCCATTCCTCAGGAAGCGCACAGGGCATCCACGTGGCCTCACATCGCTGCAACGAATGGGAGTGGGACTCTTCATATCGATCTTTGCCATGGCTTCAGCTGCATTAGTGGAAAAGAAAAGACGCGAGCACTACCCCGAAAGGAATAGCATTAGCGTGTTCTGGTTGTTCCCTCAGTACTTCATGATTGGGTGTGCAGAGGTATTCACTTACGTGGGGCAGTTGGAGTTCTTCTACGACGAAGCGACGGATGGGACTAGAAGCATTAGCAGTGCAATGTTTCTGTGCGAGTTTGGGATCGGAAGCTGGTTGAACAGTGTGTTGGTGCAGATCATTGAAGGTGCCACTGGTGGAGGAAACAGAGGGTGGTTGAGGAACGATCTTAATGCGAGTAGATTGGATTACTTTTATTGGATCGTAACTGCTTTCAATGCTCTCAACTTCATCGTCTACGTATTCGTCGCCTATTCTTACAAAGGGAAAGGGAAACCACGTACCTAG 1668 0.4826 MEWSSDLVSNGRVDVQGRIANKRTTGGWKASPFIIVNEVVERLAFFAVGVNMVNYLISVMHQSLPDAASHSSQWAGAAYVFTLLGAFLADAYFGRFRTILIFSSIYALGMVMLTLLASLSNLHPQQHKEATKDQNAFLYGALALIALGTGGIKPCVSSFGADQFDEGDDKEVVHKSAFFNWFFFAINTGALFGITVPVYVQEQVGWSWGFGIPTIFMFCSILILLLGVRYYRFQKPMGSPFTRFLQVMVASFRNHLKGVKLGIDTPLYEVQTPNSDIVGASKLPHTQQYSFLDKAAVIVDPEGTNRRNRWEICTVTQVEEFKSFIRVLPVWASTIALALTYSQQSTFFISQANISNRNLSSKFIIPAGSVPVFAAINAVIVVPIYEKLVVPFLRKRTGHPRGLTSLQRMGVGLFISIFAMASAALVEKKRREHYPERNSISVFWLFPQYFMIGCAEVFTYVGQLEFFYDEATDGTRSISSAMFLCEFGIGSWLNSVLVQIIEGATGGGNRGWLRNDLNASRLDYFYWIVTAFNALNFIVYVFVAYSYKGKGKPRT* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2200 555 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 8 552 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo17g2200 555 SUPERFAMILY MFS general substrate transporter 19 550 IPR036259 -
Amo17g2200 555 CDD MFS_NPF 32 545 - -
Amo17g2200 555 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 85 109 IPR018456 GO:0006857|GO:0016020|GO:0022857
Amo17g2200 555 PANTHER PEPTIDE TRANSPORTER 8 552 - -
Amo17g2200 555 Gene3D MFS general substrate transporter like domains 2 553 IPR036259 -
Amo17g2200 555 Pfam POT family 96 509 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2200 Amo-Chr17 112884621 112888596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2200 1 548 Organic Solute Cotransporters AT5G01180 46.549 1.89e-180 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2200 K14638 - zju:107412696 783.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2200 17 112884621 112888596 Amo17g2200 17 112884621 112888596 ECH