Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2183 ATGGGTGCTCTTGCCACTCTGCCTCCTTGGATTTCCGAGGACGACCCTCTCCTCAAGAACGCCGTTGAGGCCGGTGCTTCTTTAGAGTCACTAGCAAAAGGTGCGGTGCAGTTTTCTCGAAGATATAGTTTTAGAGAAATACGCGATAGATGGTACTCTATCCTCTATGATCCTATTATTTCTGCGGAAGCATCTGCAGGCATGACAGACTTTGAGATTTCTACTTCACCTCTCCCATCGAAGTTCATCAAGTTTGGAAATACAAGAGAACGCAAAATTGATTCTGCAAAAAGAAAAGCTGAAAGTGTACGGACTTCCTATTATGCTATGCGGAAAAGAATCCGCAATGACGCATTTAATTCCATGGACTTAGGTTTCCTTGTGGATCCTGAAAATGACAATTATGGTGTAAATGGAAGTGAGAGTTTGCCTAAAAACTGTTTGGCCGAAGGTGAAACGTCCAATCATTTTGGTTTCCATGGTTCACATACTGATCCTGCTCAGTATTCTTTTCCTGAAAATATGATGAATGGTGGTGCTATAACGAATGGAGTTACTATCCATGCATATTACACCGGAGCTAAGGATCCAGTTCAAGACAATATACCTGCTGAGCAACAAGATGTACTTAGAGAAGAACCTCAATTTCTTCGAGGTGATGTTTCCAATGGAGCTGCAGAGGAGATGGGTGTTCCAGAAGAACTAGCCATTGATAGCTTCATTGATGACGATAATTTAGAGACCCCATTTGATCAGATCAACAGTGACCCTGGAAACCTGTGTTCTGAGTTTGATGGAAATGATGTATTTGATTCATCTGAAATGGAATGTGGTACATCATTTAATAGCTTACATTTGTCTCCACTCCCGGAAATGCCAGTGTGGAAAACACATGCGAGCATTCAAGAACCTGAAATGCCATGTGGTGATTTTAAGGATTCTATTGCTTGTGGGGAGGCTTACCTGGCAGAACTGTCCAATTCTCTCTTAAACTTCACAAATGAGGAAGAACTCTATCTGATGGATGTTGATGGAAAAGACGGGATTGATAAGTCTTATTATGATGGTCTGAGTTCACTTCTACTAAGTTCTCCTAATGATGTTAGCCAAGATCAGTTGCCTGAAAAGGCTGAGGCAGAGTCTTCAGTGGCCTCACAAGCAAAAGTTTCAAATCTGTCAGTTTCATGTCATGCAAAAGTAGATGATAACAATAGACTACAGTCTAGCGATGCCCAAACAGTTCAGAAATCAGATATCCAAGTATCATCTTCTGTCTCTGTTAAAGATCCTCGTTTTCCTGAACTAATTAATGGAGTTGTATTCTGTGCTCTAAACACTGAAGAACCAGAAGTTCCATGCAATGTTGATGTTTTCTTACTACCCGTGGATGTGCCTCCTTCAACATCTCCATATTCATCTGAATGGGTGTATACAGAATCCAATAAGCCAATTTCATCATATGTTCAGGATTATGGATTTAGTAACCATAAAGCTCTTGAAAGAAGTAGAATGATAAAGGTAGAACAGAAAAAACCCGCAGAATTTCGTGGATCTTCTCAGGTGATGGGATCTCCTCCCTTTCCAGGGGTACAGTGTGAATTTTCGAATTCTCATGCATCACACATAGCGTCCAGGAGTGCTGTGACTGTTTCTGGTGGGTTAGGTGGAAATAAAGCTAGCACAACCAATGCTATCATGCATGCAAACCCAAAGGACACACCTATCAATGTAGGCTTGACACATTGTCTAAATAGTCGTGTGACAAACTCTTATAGTGAGAAACCAACCCTTGGGTCTAATGGCTTCAGAAATCATCCTTATTCTGATGGCTCTGGCATGAAACAGGGAAAAAACTTACCCTTGCCAATTCAAGATCGTCATTGGCAACATGCTGAAGTGGGGTCTTCAGATGTTCCCAAGTCTCATCTGGTGGCAATTCCTCCAACTTTAGATGAAGAGCAATATATGGAGAGTGATGATGATGTTCCTTGTTATTCTGATATAGAGGCAATGATACTTGATATGGATCTGGATCCAGATGATCAGGATTTGTTTTATAACGAGGAAGTATCAACATATCAACATGAGGAAACTAAGCGGACTATCATAAGGATGGAACAGGGTGCTCATTCCTATATGCAGAGAGCCATTGCTTTACATGAAGCAATTGCCATTTTATATGGTCGCCATTCAAAGCATTATATTAAGAAAGCCGAGGTTTTACTTGGACGGGCAACAGAAGGTGTTCCAGTAGATATTGACTTGGGCAAAGGAGGTTATGCAAATAAAATATCTCGACACCAGGCAATTATAAAGCTGGACAATGATGGATCTTTCTACATTAAAAACTTTGGCAAGACTTCAATATTGGTGAATAACAAAGAAGTGCAGAGGGGTCAGTCTCAAAGACTATACTCCAATTGTTTGATCGAGTTGAGGGGGATGTCATTCATATTTGAGACAAATCCTAGTCGTGTGAAGCAGTATCCGGATCAGCATATTACAGACAATTCATAA 2517 0.408 MGALATLPPWISEDDPLLKNAVEAGASLESLAKGAVQFSRRYSFREIRDRWYSILYDPIISAEASAGMTDFEISTSPLPSKFIKFGNTRERKIDSAKRKAESVRTSYYAMRKRIRNDAFNSMDLGFLVDPENDNYGVNGSESLPKNCLAEGETSNHFGFHGSHTDPAQYSFPENMMNGGAITNGVTIHAYYTGAKDPVQDNIPAEQQDVLREEPQFLRGDVSNGAAEEMGVPEELAIDSFIDDDNLETPFDQINSDPGNLCSEFDGNDVFDSSEMECGTSFNSLHLSPLPEMPVWKTHASIQEPEMPCGDFKDSIACGEAYLAELSNSLLNFTNEEELYLMDVDGKDGIDKSYYDGLSSLLLSSPNDVSQDQLPEKAEAESSVASQAKVSNLSVSCHAKVDDNNRLQSSDAQTVQKSDIQVSSSVSVKDPRFPELINGVVFCALNTEEPEVPCNVDVFLLPVDVPPSTSPYSSEWVYTESNKPISSYVQDYGFSNHKALERSRMIKVEQKKPAEFRGSSQVMGSPPFPGVQCEFSNSHASHIASRSAVTVSGGLGGNKASTTNAIMHANPKDTPINVGLTHCLNSRVTNSYSEKPTLGSNGFRNHPYSDGSGMKQGKNLPLPIQDRHWQHAEVGSSDVPKSHLVAIPPTLDEEQYMESDDDVPCYSDIEAMILDMDLDPDDQDLFYNEEVSTYQHEETKRTIIRMEQGAHSYMQRAIALHEAIAILYGRHSKHYIKKAEVLLGRATEGVPVDIDLGKGGYANKISRHQAIIKLDNDGSFYIKNFGKTSILVNNKEVQRGQSQRLYSNCLIELRGMSFIFETNPSRVKQYPDQHITDNS* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2183 838 SMART FHA_2 739 796 IPR000253 GO:0005515
Amo17g2183 838 CDD FHA 736 820 IPR000253 GO:0005515
Amo17g2183 838 Pfam N-terminal region of micro-spherule protein 10 74 IPR025999 -
Amo17g2183 838 Gene3D - 684 835 - -
Amo17g2183 838 ProSiteProfiles Forkhead-associated (FHA) domain profile. 740 796 IPR000253 GO:0005515
Amo17g2183 838 Pfam FHA domain 741 812 IPR000253 GO:0005515
Amo17g2183 838 PANTHER MICROSPHERULE PROTEIN 1 1 829 IPR037912 GO:0002151|GO:0031011|GO:0071339
Amo17g2183 838 SUPERFAMILY SMAD/FHA domain 731 825 IPR008984 GO:0005515
Amo17g2183 838 PANTHER FHA DOMAIN PROTEIN 1 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2183 Amo-Chr17 112095227 112101348 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2183 - - aprc:113865691 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2183 17 112095227 112101348 Amo17g2183 17 112095227 112101348 ECH
Amo08g0153 08 2760049 2765384 Amo17g2183 17 112095227 112101348 hybridization