Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2146 ATGCTGTTCATAATTGGATTAGGATTGGGAGATGAGAGAGACATAACGTTGAGGGGGTTGGAAGCAGTGAAGAGCTGCGAAAARGTTTACATGGAATCCTACACTTCCCTCCTCTCATTTGGGCTCGACTCTCATGGCCTCTCCAACCTGGAAAAGCTGTATGGGAAAACTATAACTCTAGCAGACAGAGAGATGGTGGAAGAGAAAGCCCATCACATTCTTGAAGAAGCTCGCCACTCCCATGTYGCCTTCCTCGTTGTTGGGGACCCTTTTGGGGCCACGACCCACACTGACCTTGTTGTTAGAGCTAAGAAGATGGGGATTCATGTCCAGAGTGTGCACAATGCCTCTGTCATGAATGCTATTGGCATCTGCGGTCTCCAACTGTATCGCTATGGCGAAACTGTTTCCATTCCGTTCTTCACTGRCTCTTGGAGGCCCGATAGCTTCTATGAAAAGATTCACAGTAATCGAACCATGGGACTCCACACACTTTGCTTGTTAGATATTCGTGTGAAGGAGCCCACCCTCGAATCTCTGGCAAGAGGAAGAAAAACCTATGAACCCCCCAGATATATGACCATAAACACAGCCATTGAGCAGCTCTTGGAGGTTGTGCAAGAGCGCCAACAACCTGCCTACACTGAAGATACCCAGTGTGTTGGGTTTGCTCGGCTAGGAAGTGACGATCAGATGATTATAGCTGGAACAATGAAGCAGCTGCAGATGGTTGATTTTGGAGCCCCTTTACACTGCCTTGTCATAACAGGCAATACCCATCCATTAGAGGAAGAAATGCTCGAGTTTTACAGATGTAGGACCTAG 825 0.4752 MLFIIGLGLGDERDITLRGLEAVKSCEKVYMESYTSLLSFGLDSHGLSNLEKLYGKTITLADREMVEEKAHHILEEARHSHVAFLVVGDPFGATTHTDLVVRAKKMGIHVQSVHNASVMNAIGICGLQLYRYGETVSIPFFTXSWRPDSFYEKIHSNRTMGLHTLCLLDIRVKEPTLESLARGRKTYEPPRYMTINTAIEQLLEVVQERQQPAYTEDTQCVGFARLGSDDQMIIAGTMKQLQMVDFGAPLHCLVITGNTHPLEEEMLEFYRCRT* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2146 274 SUPERFAMILY Tetrapyrrole methylase 1 271 IPR035996 GO:0008168
Amo17g2146 274 PANTHER DIPHTHINE SYNTHASE 1 272 IPR004551 GO:0004164|GO:0017183
Amo17g2146 274 Pfam Tetrapyrrole (Corrin/Porphyrin) Methylases 1 241 IPR000878 GO:0008168
Amo17g2146 274 Gene3D - 117 273 IPR014776 GO:0008168
Amo17g2146 274 CDD DHP5_DphB 1 259 IPR004551 GO:0004164|GO:0017183
Amo17g2146 274 PIRSF Diphthine_synth 1 274 IPR004551 GO:0004164|GO:0017183
Amo17g2146 274 Gene3D - 1 116 IPR014777 GO:0008168
Amo17g2146 274 TIGRFAM dph5: diphthine synthase 1 268 IPR004551 GO:0004164|GO:0017183
Amo17g2146 274 Hamap Diphthine synthase [dphB]. 1 273 IPR004551 GO:0004164|GO:0017183
Amo17g2146 274 PANTHER DIPHTHINE METHYL ESTER SYNTHASE 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2146 Amo-Chr17 110907760 110909897 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2146 K00586 - gmx:100784092 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2146 17 110907760 110909897 Amo17g2146 17 110907760 110909897 ECH