Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2119 ATGAGGAAGTGGACGCTCCCTTCCGCTCTTCTTCTCCTTTCTCTCCTCCTCCTATTTGCAGATCAAGGTCGCAAGCTTCAGGCAAATGCCGAAGCTGATTCTGACGAGCTTGTAGATCCACCTAAGGTTGAGGACAAGATCGGTGCCGTTCCTAACGGTCTTTCCACAGATTCAGATGTCGCCAAGAGGGAGGCGGAGTCGATCTCGAAGAGATCTCTTCGCAACAACGCGCAGAAGTTTGAGTTCCAGGCCGAAGTTTCTCGGCTTATGGATATTCTCATCAACTCTCTCTACAGCAACAAGGATATTTTCCTCAGGGAGTTGATCTCTAATGCTTCTGACGCGCTGGACAAGATTAGGTTTCTCTCTCTCACCGATAAGGAGATTCTGGGGGAAGGTGATACTGCCAAGCTCGAAATCCAGATTAAGTTGGACAAGGAGAAGAAAATCCTTTCCATCCGAGACAGGGGTATTGGTATGACAAAGGAGGATTTAATAAAGAATTTGGGGACCATAGCAAAATCTGGAACCTCAGCGTTTCTTGAGAAAATGCAATCAAGTGGTGATCTCAATCTTATTGGGCAGTTTGGAGTTGGTTTCTACTCTGTGTACCTTGTGGCTGACTATGTTGAAGTAATTAGCAAACATAATGACGATAAACAGCATGTGTGGGAATCTAAAGCTGATGGAGCATTTGCGATTTCTGAAGATACATGGAATGAACCACTGGGACGTGGTACTGAGATTAGGCTACACCTCAGAGATGAAGCTGGGGAGTACTTGGAGGAGCATAAGCTTAAGGAATTGGTAAAAAAATACTCTGAATTTATTAACTTCCCTATTTATCTCTGGGCAAGCAAAGAGGTTGATGTGGAGGTCCCTGCTGATGAAGATGATGAATCATCTGAAAGCAGCTCTGAGGAAGAAAATAAAGATGATGATGCTGAGAAAAGTGAAGATGACGAAGAGAAGCCCAAGACAAAGACAGTGAAGGAAACGACTTATGAATGGGAACTTCTAAATGATGTGAAAGCTATATGGCTGCGAAATCCAAAGGAGGTTTCAGAAGAAGAGTACACCAAATTCTACCATACTCTTGCCAAGGATTTCGGTGATGAGAAACCTTTAGCATGGAGTCACTTCAATGCTGAAGGCGATGTTGAGTTCAAGGCAGTGCTTTTTGTGCCACCTAAAGCCCCTCATGATTTATATGAGAGTTATTACAACTCTAACAAATCCAATCTGAAGTTGTATGTTAGACGAGTATTTATTTCAGATGAATTTGATGAACTGTTGCCTAAATACCTCAGCTTCTTGAAGGGCCTTGTTGATTCTGACACGTTGCCACTTAATGTCTCCCGTGAAATGCTTCAACAACACAGTAGCCTGAGGACAATCAAGAAGAAACTTATCAGGAAAGCCCTTGATATGATCCGTAGGATTGCTGATGAGGATCCAGATGAGTCCACTGACAAAGATAAGAAAGAAGAGGTATCATCTGACAATGATGAGAAAAGAGGTCAATATGCTAAGTTCTGGAATGAGTTTGGAAAGTCCATCAAACTTGGCATCATTGAAGATGCTACTAACAGAAACCGTCTGGCAAAACTGCTGAGAGTTGAGACCTCAAAGTCTGAAGGTAAATTGACGTCTCTTGATCAGTACATCTCCAGAATGAAATCTGGACAAAAGGATATCTTCTACATAACTGGAACTAACAAAGAACAACTGGAAAAATCTCCTTTCCTTGAGCGGCTTAGGAAGAAAAATTACGAGGTTATTTACTTCACTGATCCAGTTGATGAATACTTGATGCAATATCTTATGGATTATGAAGACAAAAAATTCCAAAATGTGTCCAAGGAAGGTCTGAAAATTGGAAAGGACGCCAAAGCCAAGGAACTAAAGGAATCCTTCAAGGATCTCACAAAGTGGTGGAAAAGTGCACTTTCCAGTGAAAATGTTGATGATGTGAAGATATCCAACCGTTTGGATAACACTCCTTGTGTGGTGGTGACTTCGAAATTTGGTTGGAGTGCTAACATGGAGAGAATAATGCAGGCACAAACTTTATCAGATGCTAGCAAGCAAGCATACATGCGTGGCAAGAGGGTTCTTGAAATCAATCCTAGGCACCCTATTATCAAGGAGCTCAGGGAGCGTGTAGTAAAGAACCCTGAGGATGAGAGTGTGAAGCAAACAGCACAGCTGATGTATCAAACTGCTCTCTTTGAAAGTGGTTTCCTGCTAAATGACCCCAAGGATTTTGCATCTCGCATTTATGACTCAGTGAAGTCCAGCTTGGATATTAGTCCTGAAGCAACTGTGGAAGAGGAGGAAGAAGCTGAAGAAGTTGAGGCCGAGAGTGAGGCAAAGGACGGTGCATCTGCTGATGCTGATGTGAAGGACGAGTTGTAG 2418 0.4276 MRKWTLPSALLLLSLLLLFADQGRKLQANAEADSDELVDPPKVEDKIGAVPNGLSTDSDVAKREAESISKRSLRNNAQKFEFQAEVSRLMDILINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEILGEGDTAKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFLEKMQSSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQHVWESKADGAFAISEDTWNEPLGRGTEIRLHLRDEAGEYLEEHKLKELVKKYSEFINFPIYLWASKEVDVEVPADEDDESSESSSEEENKDDDAEKSEDDEEKPKTKTVKETTYEWELLNDVKAIWLRNPKEVSEEEYTKFYHTLAKDFGDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNSNKSNLKLYVRRVFISDEFDELLPKYLSFLKGLVDSDTLPLNVSREMLQQHSSLRTIKKKLIRKALDMIRRIADEDPDESTDKDKKEEVSSDNDEKRGQYAKFWNEFGKSIKLGIIEDATNRNRLAKLLRVETSKSEGKLTSLDQYISRMKSGQKDIFYITGTNKEQLEKSPFLERLRKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKIGKDAKAKELKESFKDLTKWWKSALSSENVDDVKISNRLDNTPCVVVTSKFGWSANMERIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKNPEDESVKQTAQLMYQTALFESGFLLNDPKDFASRIYDSVKSSLDISPEATVEEEEEAEEVEAESEAKDGASADADVKDEL* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2119 805 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 101 256 IPR003594 -
Amo17g2119 805 MobiDBLite consensus disorder prediction 293 319 - -
Amo17g2119 805 Hamap Chaperone protein HtpG [htpG]. 75 765 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Amo17g2119 805 Gene3D - 629 775 IPR037196 -
Amo17g2119 805 MobiDBLite consensus disorder prediction 482 503 - -
Amo17g2119 805 MobiDBLite consensus disorder prediction 773 788 - -
Amo17g2119 805 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 78 287 IPR036890 -
Amo17g2119 805 PRINTS 90kDa heat shock protein signature 78 98 IPR020575 -
Amo17g2119 805 PRINTS 90kDa heat shock protein signature 99 121 IPR020575 -
Amo17g2119 805 PRINTS 90kDa heat shock protein signature 150 167 IPR020575 -
Amo17g2119 805 PRINTS 90kDa heat shock protein signature 168 185 IPR020575 -
Amo17g2119 805 PRINTS 90kDa heat shock protein signature 193 215 IPR020575 -
Amo17g2119 805 PRINTS 90kDa heat shock protein signature 245 262 IPR020575 -
Amo17g2119 805 PRINTS 90kDa heat shock protein signature 263 281 IPR020575 -
Amo17g2119 805 Gene3D - 535 622 - -
Amo17g2119 805 SUPERFAMILY Ribosomal protein S5 domain 2-like 343 622 IPR020568 -
Amo17g2119 805 Pfam Hsp90 protein 259 792 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Amo17g2119 805 MobiDBLite consensus disorder prediction 768 805 - -
Amo17g2119 805 ProSitePatterns Heat shock hsp90 proteins family signature. 98 107 IPR019805 GO:0005524|GO:0006457|GO:0051082
Amo17g2119 805 SMART HKATPase_4 100 257 IPR003594 -
Amo17g2119 805 MobiDBLite consensus disorder prediction 293 330 - -
Amo17g2119 805 PIRSF HSP90_HTPG 53 804 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Amo17g2119 805 SUPERFAMILY HSP90 C-terminal domain 641 763 IPR037196 -
Amo17g2119 805 Gene3D - 65 299 IPR036890 -
Amo17g2119 805 MobiDBLite consensus disorder prediction 789 805 - -
Amo17g2119 805 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 19 797 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Amo17g2119 805 CDD HATPase_Hsp90-like 87 277 - -
Amo17g2119 805 PANTHER BNAA08G14800D PROTEIN 19 797 - -
Amo17g2119 805 Gene3D - 342 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2119 Amo-Chr17 110057197 110061931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2119 K09487 - gmx:100779976 1335.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2119 17 110057197 110061931 Amo17g2119 17 110057197 110061931 ECH