Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2103 ATGTCCAACCACGTCATCGAAGAATCGAACTCTTCAGCAACCAAAGAACTCGAACAAAAACAAGAGAAGGAGAAGGAAGAAGAGGAAGATGAAGATGACGAGTTACGAAAGCTCCTACTCCCCGATGTCTGTAATCTTCCTTCAGTTCCTCCTTCCGCCGTTGAATCCAACTTCGCCATTTACTTCGCTCTAGATTTTATGAAGCCAGGGCACGATCAGTACGTTTACCGGCACGCCAATGGCTTGTGTGTGATTGGTTTGGCTCCTTCCCACGTTTCTTTCAAGGATGAAGGTGGAATCACAGCCATAGATTTCAATGTGGGAAAGTCTGATCGCAGTGGGGTCAAGGTCACTGGAAAGCGTAAGAAGAATGCTCAACATTTTGAGTCCAACACGGCTTTGTGCAAAGTTTCTACCAAAAATGATTCCTATATAGTGAGGTGCTGTGTCAAAGGCTCCCTTTTGGAAGTGAACCAACAACTGATCAAGCAACCAGAACTACTCAATGCTTCGGCAGACAGGGAAGGATACATTGCTATTATAATGCCAAAACCTGCTGATTGGCTTAAGATCAAGGCCTCCCTTGTTAGCATTGAGGAATACAAGAAATTGAGGGAAGTCAGTTGA 627 0.4482 MSNHVIEESNSSATKELEQKQEKEKEEEEDEDDELRKLLLPDVCNLPSVPPSAVESNFAIYFALDFMKPGHDQYVYRHANGLCVIGLAPSHVSFKDEGGITAIDFNVGKSDRSGVKVTGKRKKNAQHFESNTALCKVSTKNDSYIVRCCVKGSLLEVNQQLIKQPELLNASADREGYIAIIMPKPADWLKIKASLVSIEEYKKLREVS* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2103 208 Coils Coil 3 38 - -
Amo17g2103 208 PANTHER UNCHARACTERIZED 19 207 IPR039169 -
Amo17g2103 208 Pfam Glycine cleavage H-protein 113 204 IPR033753 -
Amo17g2103 208 SUPERFAMILY Single hybrid motif 66 205 IPR011053 -
Amo17g2103 208 Gene3D - 66 206 - -
Amo17g2103 208 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2103 Amo-Chr17 108839570 108843515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2103 - - gmx:100775677 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2103 17 108839570 108843515 Amo17g2103 17 108839570 108843515 ECH
Amo08g0219 08 3607935 3609954 Amo17g2103 17 108839570 108843515 hybridization