Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2100 ATGCAAGCGACGGCGATGATACAGATACTGGTATCATTGGTACTGCAGTTACTGGTTTTGAAGGGTGGTGCCGATTATATTCCGCCGTCAAGATTGGAAGGGTTCGTGTACCAGCCTCGGCCATTCGATTGGGACGACACCGTTCTGATTGAAGCGTTCTACGATCCGGTGTGTCCTGATAGCAGGGATTCTTGGCCCCCACTCAAGAAAGCTATCCACCATTATGGCCATCGAGTTCAACTCGTTGTTCACCTCCTTCCTTTACCTTACCATGACAATGCTTATGTTGCGTCTCGTGCTTTGCACATTGTGAATAGATTGAATTCATCGGCAACATTCCCCTTGTTGGAATGGTTCTTCAAGCATCAGGAGAAATTCTACAATGCTCCAACGAAGAACTTGTCTAGGGCTTCTATTGTGGAGAAGATAGTGAATTCTGCAGCAAAAGTAGCTGGCAGCTCTTATCATACTGCCATAAAGAATGGATTCAATGACACCCAAAGTGATTACCAAACTAGAGTTTCTTTCAAGTATTCAACTTCGAGAGGGGTGTATGGAACGCCTTTCTTCTATGTGAATGGATTCTTGTTGCCTGATACTGGATCCGCCGTTGATTACAACGCATGGAGGAAGGTCATTGATCCATTGGTTGGTGCAAAGAGTGTAAAAAATGAAGAATCCCTTCACTACTTCTTGTAA 699 0.4464 MQATAMIQILVSLVLQLLVLKGGADYIPPSRLEGFVYQPRPFDWDDTVLIEAFYDPVCPDSRDSWPPLKKAIHHYGHRVQLVVHLLPLPYHDNAYVASRALHIVNRLNSSATFPLLEWFFKHQEKFYNAPTKNLSRASIVEKIVNSAAKVAGSSYHTAIKNGFNDTQSDYQTRVSFKYSTSRGVYGTPFFYVNGFLLPDTGSAVDYNAWRKVIDPLVGAKSVKNEESLHYFL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2100 232 Gene3D Glutaredoxin 43 213 - -
Amo17g2100 232 CDD DsbA_family 50 201 - -
Amo17g2100 232 PANTHER OS09G0542200 PROTEIN 9 229 - -
Amo17g2100 232 Pfam Thioredoxin 45 214 IPR012336 -
Amo17g2100 232 SUPERFAMILY Thioredoxin-like 14 214 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2100 Amo-Chr17 108782142 108786870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2100 - - aprc:113865392 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2100 17 108782142 108786870 Amo17g2100 17 108782142 108786870 ECH
Amo08g0223 08 3647131 3650413 Amo17g2100 17 108782142 108786870 hybridization