Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2030 ATGGAATTGTTTGTGAAAAGAGCACCTCAACAGGTTGTGGATGCAATGCGACAAACAGTGACGAATATGATTGGAACACTGCCGCCTCAATTTTTTGCAGTAACAATTACAACTGTAGCTGAAAACCTTGCACAGCTCATGTACAGTGTCATGATGACCGGATACATGTTCAGGAATGCACAATACCGTTTGGAGTTGCAAGAAAGTTTGGAACAGGTTGCTCTTCCAGAGATGCAGGATAAGAAGGATGTGCCAGACTATGCACCTGGTACACAGAAGAAGCATGTTTCAGGTGAAGTCATTCGTTGGAACAATGTATCTGGGGCTGAGACAATAGATGCTAAAAAGTATATTGAGTTACTTGAAGCAGAGATAGAGGAGCTGAATCGTCAAGTTGGGCGACAATCTAACAATGCACAAAATGAGTTGTTGGAATATCTAAAATCTCTCGAGCCTCGCAATCTGAAGGATTTGACTAGTAGTGCTGGGGAGGATGTTGTGTTTGCGATGAATACTTTTATAAAGCGCCTACTGGCTGTTTCAGATCCTAGCCAGATGAAGACTAGTGTGACTGAGACGAGTGCACCAGAACTCGCCAAACTTCTTTATTGGTTGATGGTGGTTGGGTACAGCATTCGCAATATTGAAGTTCGTTATGACATGGAAAGAGTACTTGGCACTCCTCCAAAGCTTGCCGAGTTGCCTCCAGGTGAAAATGTTTAA 723 0.4315 MELFVKRAPQQVVDAMRQTVTNMIGTLPPQFFAVTITTVAENLAQLMYSVMMTGYMFRNAQYRLELQESLEQVALPEMQDKKDVPDYAPGTQKKHVSGEVIRWNNVSGAETIDAKKYIELLEAEIEELNRQVGRQSNNAQNELLEYLKSLEPRNLKDLTSSAGEDVVFAMNTFIKRLLAVSDPSQMKTSVTETSAPELAKLLYWLMVVGYSIRNIEVRYDMERVLGTPPKLAELPPGENV* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2030 240 Coils Coil 111 145 - -
Amo17g2030 240 Pfam Protein of unknown function (DUF760) 142 225 IPR008479 -
Amo17g2030 240 Pfam Protein of unknown function (DUF760) 6 70 IPR008479 -
Amo17g2030 240 PANTHER OS02G0833400 PROTEIN 1 239 - -
Amo17g2030 240 PANTHER OS02G0833400 PROTEIN 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2030 Amo-Chr17 103606700 103610052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2030 - - aip:107609675 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2030 17 103606700 103610052 Amo17g2030 17 103606700 103610052 ECH
Amo08g0257 08 4581671 4585038 Amo17g2030 17 103606700 103610052 hybridization