Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2022 ATGGATCCTTACAAGTACCGGCCATCCAGCGCGTTCAACACACCCTTCTGGACCACCAACAGCGGCAACCCTGTTTGGAACAACAACTCCGTTCTTACTGTTGGAAACAGAGGTCCAATTCTGTTGGAGGATTATCAATTTGTGGAGAAGCTTGCAAACTTCGACAGGGAGCGGATCCCGGAGCGTGTAGTGCACGCGAGGGGAGCTAGCGCTAAGGGCTTCTTCGAAGTGACACACGACGTTTCACACCTAACATGCGCCGACTTCCTCCGCGCCCCGGGAGTGCAAACCCCCGTCATCGTCCGTTTCTCCACAGTCATCCACGAGCGCGGCAGCCCCGAGACCATCCGCGACCCCCGCGGCTTCGCCACCAAGTTCTACACCCGCGAAGGCAACTTCGATCTCGTCGGCAACAACTTCCCCGTCTTCTTCATCCGCGACGCCATGAAATTCCCTGACGTCATCCACGCCTTCAAGCCAAACCCCAAGTCCAACGTCCAAGAGAATTGGCGCATTCTCGACTTCCTCTCCCACCACCCCGAAAGCTTCAACACTTTCACGTGGTTCTATGATGACGTGGGCATCCCCATTAATTACCGTCACATGGAGGGTTTCGGTGTTCACACCTACACTCTCCTCAACAAAGCTGGCAAGGTTCTGTATGTCAAGTTTCACTGGAAGCCAACTTGTGGCGTTAAGTCCCTTCTAGAAGAAGAGGCCATTCGCATCGGAGGAACCAACCACAGCCACGCAACGCAAGATTTGTATGATTCCATCGCTGCCGGTAACTACCCCGAATGGAAGCTCTACTTTCAGACTATGGACCCTGATCACGAGGACAATTTTGACTTTGACCCTCTTGACACTACCAAGACTTGGCCGGAGGATATTCTTCCTCTTCAGCCGGTTGGTCGCTTGGTTTTGAACAAGAACATTGACAATTTCTTCGCTGAGAATGAAATGCTTGCTTTCAGTATGCATGTGGTGCCTGGTATTAGCTACTCCAATGATAAGATGCTTCAAGGTAGGATCTTCGCTTATGCTGACACTCAGAGGCATAGGCTTGGTCCTAACTATCTTCAGATTCCTGTTAATGCTCCAAAATGTGCTCATCATAACAATCACCATGATGGTTTTATGAACTTCATGCACAGGGATGAAGAGGTGAACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCACGCAGAAAGGGTCCCCATGTCTAGTGCTCTTATTAGTGGACAACGCGAAAGGAGTGTAATTGTGAAGGAGAACAACTTTAAGGAAGGCGGAGATAGATACCGTTCTTGGGCACCTGACAGACAAGAAAGATTTATCCGCAGATGGATTGAGGCATTGTCTGACCAACGTCTGACCCATGAAATCCGCAGCATTTGGATCTCATACCTGACTCAGGCTGATCGTTCTCTTGGTCAGAAGGTAGCAAGTCGTTTGAATGTGAGGCCAAACATCTAA 1476 0.5014 MDPYKYRPSSAFNTPFWTTNSGNPVWNNNSVLTVGNRGPILLEDYQFVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETIRDPRGFATKFYTREGNFDLVGNNFPVFFIRDAMKFPDVIHAFKPNPKSNVQENWRILDFLSHHPESFNTFTWFYDDVGIPINYRHMEGFGVHTYTLLNKAGKVLYVKFHWKPTCGVKSLLEEEAIRIGGTNHSHATQDLYDSIAAGNYPEWKLYFQTMDPDHEDNFDFDPLDTTKTWPEDILPLQPVGRLVLNKNIDNFFAENEMLAFSMHVVPGISYSNDKMLQGRIFAYADTQRHRLGPNYLQIPVNAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRFDPVRHAERVPMSSALISGQRERSVIVKENNFKEGGDRYRSWAPDRQERFIRRWIEALSDQRLTHEIRSIWISYLTQADRSLGQKVASRLNVRPNI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2022 491 SUPERFAMILY Heme-dependent catalase-like 13 488 IPR020835 GO:0020037
Amo17g2022 491 PRINTS Catalase signature 31 54 IPR018028 GO:0004096|GO:0006979|GO:0020037
Amo17g2022 491 PRINTS Catalase signature 94 112 IPR018028 GO:0004096|GO:0006979|GO:0020037
Amo17g2022 491 PRINTS Catalase signature 115 132 IPR018028 GO:0004096|GO:0006979|GO:0020037
Amo17g2022 491 PRINTS Catalase signature 134 152 IPR018028 GO:0004096|GO:0006979|GO:0020037
Amo17g2022 491 PRINTS Catalase signature 299 326 IPR018028 GO:0004096|GO:0006979|GO:0020037
Amo17g2022 491 PRINTS Catalase signature 330 356 IPR018028 GO:0004096|GO:0006979|GO:0020037
Amo17g2022 491 PANTHER CATALASE 2 491 IPR018028 GO:0004096|GO:0006979|GO:0020037
Amo17g2022 491 Pfam Catalase-related immune-responsive 423 485 IPR010582 -
Amo17g2022 491 ProSitePatterns Catalase proximal active site signature. 54 70 IPR024708 GO:0004096
Amo17g2022 491 Gene3D Catalase core domain 15 490 - -
Amo17g2022 491 ProSiteProfiles catalase family profile. 14 491 IPR018028 GO:0004096|GO:0006979|GO:0020037
Amo17g2022 491 PANTHER CATALASE 2 491 - -
Amo17g2022 491 PIRSF Catalase_clade1-3 8 490 IPR024711 GO:0004096|GO:0006979|GO:0020037
Amo17g2022 491 SMART Catalase_2 18 400 IPR011614 GO:0004096|GO:0020037
Amo17g2022 491 CDD catalase_clade_1 16 485 - -
Amo17g2022 491 Pfam Catalase 18 397 IPR011614 GO:0004096|GO:0020037
Amo17g2022 491 ProSitePatterns Catalase proximal heme-ligand signature. 343 351 IPR002226 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2022 Amo-Chr17 103344330 103348591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2022 K03781 - zju:107419839 887.486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2022 17 103344330 103348591 Amo17g2022 17 103344330 103348591 ECH
Amo08g0263 08 4669810 4674933 Amo17g2022 17 103344330 103348591 hybridization