Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1968 ATGGCTTCCGTTTCGTGGTTCTGTTGTCTTCAAATGCGACCTACGCCATGCCACTCCACCACACCCTTCGCCGCACCCATAACAACACTTCACCAACAACACCACAACCCATCTTCACTTTCTTCTACCGGAGAGGAAGGATCATCACATGGTGTTCATAGAAGACAGCTACTTGTTCACACGGCAGCCGCAGCTGCATTATTAGCACCCGCAGCACTTGTTCCAAATGCATCAGCACTCAATGATGTGTCTACTGAGGAGGATGTTCGTATTTACACTGATGATGTCAACAGGTTCAAGATAGCTATACCCCCAGATTGGCAAGTAGGAACAGGAGAGCCCGATGGGTTTAAATCGATTACCGCTTTCTACCCGCAAGAGGCTTCCAATTCCAATGTGAGCGTTGCCATCACAGGGGTGGGTCCGGATTTTACTAAGATGGAATCGTTTGGTAAAGTGGAAGAATTTGCCGAGACCCTGATTGGTGGATTGGACAGAAGCTGGCAAAGACCACCGGGTGTGGCTGCCAAACTCATAGATTGTAAATCATCCAAGGGGTTTTATTACATAGAGTATTCGCTGCAAAATCCGGGTGAGAGTCGCAGAACCTTATATTCTGCTATTGGAATGGCATCAAATGGTTGGTATAACAGACTCTACACGGTGACAGGACAGTTTGTAGAAGAGGAAACTGACAAGTATGCTTCCAAAGTGAAAAAGGCTGTTGCATCATTTAGGTTCATATGA 747 0.4659 MASVSWFCCLQMRPTPCHSTTPFAAPITTLHQQHHNPSSLSSTGEEGSSHGVHRRQLLVHTAAAAALLAPAALVPNASALNDVSTEEDVRIYTDDVNRFKIAIPPDWQVGTGEPDGFKSITAFYPQEASNSNVSVAITGVGPDFTKMESFGKVEEFAETLIGGLDRSWQRPPGVAAKLIDCKSSKGFYYIEYSLQNPGESRRTLYSAIGMASNGWYNRLYTVTGQFVEEETDKYASKVKKAVASFRFI* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1968 248 PANTHER - 33 248 - -
Amo17g1968 248 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 33 248 - -
Amo17g1968 248 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 79 247 - -
Amo17g1968 248 SUPERFAMILY Mog1p/PsbP-like 90 247 IPR016123 -
Amo17g1968 248 MobiDBLite consensus disorder prediction 31 47 - -
Amo17g1968 248 Pfam PsbP 89 247 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Amo17g1968 248 MobiDBLite consensus disorder prediction 31 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1968 Amo-Chr17 100998582 101000566 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1968 - - gmx:100785276 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1968 17 100998582 101000566 Amo17g1968 17 100998582 101000566 ECH