Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1712 ATGGGTTCTTTGAGCATAACAGAAAAGCTTCATGCTGTGTGCATACCATACCCAGCACAAGGCCACATAAACCCAATGTTAAAACTAGCAAAGCTTCTTCACTTCAAAGGCTTCCACATAACTTTTGTTAACACCGAATACAACCACAAACGCCTTCTCAAATCAAGGGGCCCTGATTCCCTTAACGGCTTACCTTCGTTCCGTTTCGAAACCATCCCTGACGGTCTACCTGAGCCCGATGTGGATGCGACGCAGGATATTCCTTCCCTCTGCGAGTCCACTAGGAAGACATGCTTGCCTCACTTCAAGAATCTCATTTCAAAGCTCAATAGAAATAGTGAAGGTTCAGATGCCCAAAACGCCCCTCCTGTTACTTGCATAGTCTCTGATGGTTGCATGAGTTTCACCGTTGATGCTGCCGAAGAGTTTGGAATCCCCGAGGTTCTGTTTTGGACCACAAGTGCTTGTGGCTTCATGTGCTATATGCAGTATCGCCATCTTGTTGCCAAGGGAATAACTCCACTCAAAGATTCAAGTTATATCACAAATGGTTATTTGGAGAACACAATCGATTGGATCCCTGGAATCAAAGATATTCGATTGAGGGATGTTCCAAGCTTCGTGAGGACCATAGATCCCAATGACCTAATGCTTGATTTCATATTGGGTGAGACGAAAAGAGCTTCCAGAGGGTCGGCAATCGTAGTGAACACATTTGATGCTTTGGAACACGATGTTATGGAAGCACTATCCACAATTCTGCCACCGGTCTATTCCATTGGTCCCTTGAATCTTCTACTCAACAATGTTACCGACAAAGATTTGAAGAAAATTGGTTCCAATCTATGGAAAGAGGAGCCAGAGTGTCTTGAATGGCTTGACAACCAAGAACCAAATTCAGTTGTTTATGTGAACTTTGGCAGCATAACGGTTATGACAAGTGACCAATTAATTGAATTTGCTTGGGGACTTGCCAACAGCAAGAAAACATTTTTATGGGTTATTAGGCCGGATCTAGTGGCCGGCGACAACGCCGTGTTGCCTTCTGAGTTCATTGAAGAGACCAAGAACAGAGGATTATTGTCAAGTTGGTGTCCACAAGAGCAAGTTTTGGCGCACCCTTCGATTAAAGGGTTCTTGACGCACAGCGGTTGGAACTCGACGTTGGAGAGTATTTGTGGTGGTGTTCCAATGATATGTTGGCCATTCTTTGCTGAGCAACAAACAAATTGTAGATTCTGTTGTAAGGAGTGGGGGATTGGGATGGAGATCGAGGATGTTAGAAGGGACAGAATTGAGAATCTTGTGAGGGAGTTGATGGATGGAAAAAAGGGTCAAGAGATGAAAAACAAGGCATTGGAGTGGAAGAATTTGGCAGTTGATGCTGCTTCTAGCCCAAATGGATCATCTTTGAAGAATTTGGACAGCATGGTTAACCAAATTCTTTTGAGCAGCAAAGTTGCTAAAAAGTAG 1473 0.4392 MGSLSITEKLHAVCIPYPAQGHINPMLKLAKLLHFKGFHITFVNTEYNHKRLLKSRGPDSLNGLPSFRFETIPDGLPEPDVDATQDIPSLCESTRKTCLPHFKNLISKLNRNSEGSDAQNAPPVTCIVSDGCMSFTVDAAEEFGIPEVLFWTTSACGFMCYMQYRHLVAKGITPLKDSSYITNGYLENTIDWIPGIKDIRLRDVPSFVRTIDPNDLMLDFILGETKRASRGSAIVVNTFDALEHDVMEALSTILPPVYSIGPLNLLLNNVTDKDLKKIGSNLWKEEPECLEWLDNQEPNSVVYVNFGSITVMTSDQLIEFAWGLANSKKTFLWVIRPDLVAGDNAVLPSEFIEETKNRGLLSSWCPQEQVLAHPSIKGFLTHSGWNSTLESICGGVPMICWPFFAEQQTNCRFCCKEWGIGMEIEDVRRDRIENLVRELMDGKKGQEMKNKALEWKNLAVDAASSPNGSSLKNLDSMVNQILLSSKVAKK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1712 490 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 55 482 - -
Amo17g1712 490 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 9 55 - -
Amo17g1712 490 CDD GT1_Gtf-like 10 467 IPR002213 GO:0008194
Amo17g1712 490 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 216 445 IPR002213 GO:0008194
Amo17g1712 490 Gene3D Glycogen Phosphorylase B; 284 461 - -
Amo17g1712 490 PANTHER GLYCOSYLTRANSFERASE 9 55 - -
Amo17g1712 490 PANTHER GLYCOSYLTRANSFERASE 55 482 - -
Amo17g1712 490 ProSitePatterns UDP-glycosyltransferases signature. 364 407 IPR035595 -
Amo17g1712 490 Gene3D Glycogen Phosphorylase B; 11 468 - -
Amo17g1712 490 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1712 Amo-Chr17 72986238 72989074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1712 1 486 Glycosyltransferase AT1G22400 59.756 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1712 - - gmx:100784251 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1712 17 72986238 72989074 Amo17g1712 17 72986238 72989074 ECH