Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1618 ATGGAAGCTATCAGAAAACAAGCCTCCAAGCTTCGAGAACAAGTCGCTCGCCAACAGCAGGCTGTGCTGAAACAATTTGGAGGTGGGGGATATGGAGGTTCAGATAATATGGTTACTGATGAAGTAGAGCTTCAACAACATCAGAAACTTGAGAAGCTTTACATATCAACACGTGCAGGAAAGCATTATCAAAGAGATATTGTCCGTGGTGTAGAAGGTTATATTGTTACTGGATCCAAGCAGGTTGAAATTGGAGCAAAGTTGTCAGAAGATAGCAGGAAATATGGATCYGAAAATAATTGCACTAGTGGTAATACGTTGTCYAGGGCTGCACTAAGTTACTCACATGCCCATGCACAAATGGAGAAGGAGCGTGGGAACTTACTGAAAGCTCTGACCACACAGGTTGCAGAGCCCCTAAGAGCAATGGTGATGGGAGCTCCGTTGGAGGATGCTKGGCATCTTGCTCAACGTTATGACAGAATGCGTCAGGAAGCTGAAGCACAGGCTATCGAAGTTTCCAAACGCCAGGCAAGAGTAAGAGAAACACCAGGAAATGCTGAAAGTGCTATGAAACTAGAAGCAGCGGAAACAAAGCTGCAAGACCTGAAGTCAAACATGACCATATTGGGTAAGGAAGCTGCTGCAGCATTGACTGCTGTTGAAGCGCAGCAACAGAGGTTAACCCTCCAGCGTCTTATAGCTATGGTTGAAGCAGAGCGTGCCTATCATCAGAGAGTACTCCAAATACTTGATCAACTTGAGGGAGAGATGATATCAGAAAGACAACGAATTGAAGCCCCTCCTACACCTAGTGTGGATAACAGCATGGCACCACCCCCATCATATGAAGAAGTGAATGGTGTCTATGCTTCTCAGACACACAATGGCATGACAGATAGTATGGGTTACTTCTTAGGAGAGGTTTTATTTCCATATCATGCTGAGTCTGAAGTTGAACTGAATCTATCCATTGGGGATTTTATTGTTGTTCGAAAGGTTTGTAGCTCATTGACTGCCTGA 1023 0.4457 MEAIRKQASKLREQVARQQQAVLKQFGGGGYGGSDNMVTDEVELQQHQKLEKLYISTRAGKHYQRDIVRGVEGYIVTGSKQVEIGAKLSEDSRKYGSENNCTSGNTLSRAALSYSHAHAQMEKERGNLLKALTTQVAEPLRAMVMGAPLEDAXHLAQRYDRMRQEAEAQAIEVSKRQARVRETPGNAESAMKLEAAETKLQDLKSNMTILGKEAAAALTAVEAQQQRLTLQRLIAMVEAERAYHQRVLQILDQLEGEMISERQRIEAPPTPSVDNSMAPPPSYEEVNGVYASQTHNGMTDSMGYFLGEVLFPYHAESEVELNLSIGDFIVVRKVCSSLTA* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1618 340 SUPERFAMILY BAR/IMD domain-like 47 258 IPR027267 -
Amo17g1618 340 Coils Coil 220 240 - -
Amo17g1618 340 Coils Coil 1 21 - -
Amo17g1618 340 PANTHER SH3 DOMAIN-CONTAINING 1 337 - -
Amo17g1618 340 Gene3D Arfaptin homology (AH) domain/BAR domain 45 267 IPR027267 -
Amo17g1618 340 Coils Coil 186 213 - -
Amo17g1618 340 Coils Coil 149 152 - -
Amo17g1618 340 MobiDBLite consensus disorder prediction 265 285 - -
Amo17g1618 340 Coils Coil 154 176 - -
Amo17g1618 340 PANTHER PROTEIN, PUTATIVE-RELATED 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1618 Amo-Chr17 66100730 66104940 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1618 - - gmx:100783004 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1618 17 66100730 66104940 Amo17g1618 17 66100730 66104940 ECH