Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1563 ATGGCAGCAGCGAGTAGCAAGATTCTGGTGATCGGAGGCACCGGCTACATTGGGAAATTCGTGGTAGAAGCCAGCGCCAAGACCGGCCACCCAACCTTCCTTCTTGTCAGGGAATCCACTCTTTCCAACCCAGAAAAGGCCCAAATTATCGACAAATTCAAGACCCTGGGGGTCAATCTTATTTCGGGTGATCTGTATGATCACGAAAGTTTGGTGAAGGCCATCAAGCAGGTGGACGTCGTCATCTCTACCGTCGGATATGCCCAGTTAGCTGATCAAGACAAGATCATTTCTGCCATCAAGGAGGCAGGAAATGTCAAGAGATTTCTTCCCTCGGAATTCGGGAATGATGTGGACCGAACTACCGCAGTTGATCCCGCAAAGAGTGCATTTGCTACCAAGTCCAAAATTCGTCGAACCGTTGAGGCTGAAGGAATTCCGTACACCTATGTGTCTTCCAACTTCTTTGCTGGTTACTTTCTACCCAATCTGTCACAGCCTGGAGCTACCTCTCCCCCAAGAGACAAAGTTGTTATCCTTGGGGATGGAAACGCCAAATCTGTTTGGAACAAGGAAGAGGACATCGCAGCTTACACCATCAAAGCGGTGGATGATCCAAGAACCTTGAACAAAATTCTCTATATTAGACCCCCAGCTAATACCTTGTCATTCAATGAATTAGTGTCTCTCTGGGAGAACAAGATTGGTAAGACTCTTGAGAAGGTCTATGTACCGGAAGAACAAGTCCTCAAGCAAATTCAAGAGTCTGCCCCACCCTTGAACGTGGTCCTTTCTATTACCCATGCTGTGTATGTGAAGGGGGATCAAACTAACTTTGAAATTGAGGAATCTTTTGGAGTGGAGGCATCACAGCTCTATCCCGATGTCAAATACACAACGGTGGATGAGTATCTTAGTCAGTTTGTCTGA 930 0.4688 MAAASSKILVIGGTGYIGKFVVEASAKTGHPTFLLVRESTLSNPEKAQIIDKFKTLGVNLISGDLYDHESLVKAIKQVDVVISTVGYAQLADQDKIISAIKEAGNVKRFLPSEFGNDVDRTTAVDPAKSAFATKSKIRRTVEAEGIPYTYVSSNFFAGYFLPNLSQPGATSPPRDKVVILGDGNAKSVWNKEEDIAAYTIKAVDDPRTLNKILYIRPPANTLSFNELVSLWENKIGKTLEKVYVPEEQVLKQIQESAPPLNVVLSITHAVYVKGDQTNFEIEESFGVEASQLYPDVKYTTVDEYLSQFV* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1563 309 Pfam NmrA-like family 8 298 IPR008030 -
Amo17g1563 309 PANTHER PINORESINOL REDUCTASE-RELATED 1 309 - -
Amo17g1563 309 CDD PCBER_SDR_a 7 304 IPR045312 GO:0016491
Amo17g1563 309 Gene3D - 7 295 - -
Amo17g1563 309 PANTHER ISOFLAVONE REDUCTASE HOMOLOG P3-RELATED 1 309 - -
Amo17g1563 309 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 255 IPR036291 -
Amo17g1563 309 Gene3D - 155 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1563 Amo-Chr17 60559344 60560869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1563 K23050 - gmx:548027 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1563 17 60559344 60560869 Amo17g1563 17 60559344 60560869 ECH