Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1506 ATGGATAAGAAGAGATGGTTATGGAAACATAACTCTTCCAAGAAGGGTCCTGGCGAAACCGATAGCTCTGGATCAGTATCATCTCATTCTGAGGAAGGATCGAAGGAATCTCCAAATGGAAGTAGCCTGTCCCCTGCTGTCACCTCAAAAACCGCAGCCTGGGCAAATGATGCAAATTGTCCATTTTCTAATGAACAATTGCCTGTAGAAACTTCAAAACCTCTATCTACTGCAGGTATGATGAACGATGGTTTGCTAGAGAAAGATGAACATGGAGAAAATGAAAATATAAAAAATGTAGAGGAAGGTTATCTTATGTCGAAGAAGCTATCTGCAGCGCTCGTCAATGTCAATACCAAAGAAGATTTGGTTAAGCAGCATGCGAAAGTTGCTGAAGAAGCCATTGCAGGCTGGGAAAAGGCTGAAAATGAAGTGTCATTTTTGAAGAAGCAACTTGAAGCAGCAACTCACAAGAGTTCCACTCTGGAAGATCGAGTCACCCATCTTGATGGTGCACTTAAGGAGTGTGTTAGGCAGCTAAGACAGACAAGAGAAAAGCAGGAAGAGAATATGGGTGATGCAATAGAACAGCGGACTTGTGACTTGGAATTGGCCAAAATTAAACTTCAGAGAAGAGTTTCTGAGCTCCAGAGCAAATTAGAGGCTTGTAATGCCAAATCTTCTGTTGATCTTGAATTTTGTCACAAGGTTGAGCTTTTGGAGAAAGAGAACATGGCTCTCCGGCAGGAACTCTTGGCTCAATCAGAAGAGCTGGAAATGAGGACAATTGAGAGAGATTTAAGTACTCAAGCTGCTGAGACAGCTAGCAAGCAACACTTAGAAAGCATCAAGAAAATAGCCAAGCTGGAGGCTGAGTGCCGGAGACTGAAGAGCATTGCTTCAAGAGCTTCTGTAGTTAATGATCATAAATCTGCTGTTTCATCCTCATTTTGTGTTGAGTCTTTCACAGACAGTCAATCAGACAGTGGGGAGCAACTTAATGCAGTTGAGATTGATACCCACAAGACAACCTGCTCAGACCCGAACAAGTGTGAGCCGAGTTGTTCTGATTCATGGGCATCTGCATTAATAGTCGAGCTTGATCAGTTTAAGAATGAAATGTCCCGACAAACTCCAACCAATTCTGTTAAACTTGATCTCATGGATGATTTTCTTGAAATGGAACGACTTGTTGCATTGCCTGAGACCAAAGAATGA 1218 0.4236 MDKKRWLWKHNSSKKGPGETDSSGSVSSHSEEGSKESPNGSSLSPAVTSKTAAWANDANCPFSNEQLPVETSKPLSTAGMMNDGLLEKDEHGENENIKNVEEGYLMSKKLSAALVNVNTKEDLVKQHAKVAEEAIAGWEKAENEVSFLKKQLEAATHKSSTLEDRVTHLDGALKECVRQLRQTREKQEENMGDAIEQRTCDLELAKIKLQRRVSELQSKLEACNAKSSVDLEFCHKVELLEKENMALRQELLAQSEELEMRTIERDLSTQAAETASKQHLESIKKIAKLEAECRRLKSIASRASVVNDHKSAVSSSFCVESFTDSQSDSGEQLNAVEIDTHKTTCSDPNKCEPSCSDSWASALIVELDQFKNEMSRQTPTNSVKLDLMDDFLEMERLVALPETKE* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1506 405 Coils Coil 272 292 - -
Amo17g1506 405 Coils Coil 206 226 - -
Amo17g1506 405 MobiDBLite consensus disorder prediction 17 78 - -
Amo17g1506 405 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 1 404 - -
Amo17g1506 405 Coils Coil 237 257 - -
Amo17g1506 405 MobiDBLite consensus disorder prediction 1 16 - -
Amo17g1506 405 Coils Coil 138 165 - -
Amo17g1506 405 Pfam Filament-like plant protein, long coiled-coil 120 226 IPR008587 -
Amo17g1506 405 Pfam Filament-like plant protein, long coiled-coil 352 403 IPR008587 -
Amo17g1506 405 Pfam Filament-like plant protein, long coiled-coil 235 299 IPR008587 -
Amo17g1506 405 Coils Coil 177 197 - -
Amo17g1506 405 MobiDBLite consensus disorder prediction 1 93 - -
Amo17g1506 405 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1506 Amo-Chr17 55038753 55042034 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1506 - - aprc:113847186 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1506 17 55038753 55042034 Amo17g1506 17 55038753 55042034 ECH