Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1504 ATGAACGCCATAGCAACTGCTTCAGCTCTCACTCTGCCAATCTTCTGTAGAACAGCCAAACTTGACAGCAAAAAGGGTTTGAAAGGTAAATTCAGCGTGCTTGCTGTATTCGGAGAAGTAGAAAAGAAGAATGCATGGAGTGCAATCTTTGACGTGGAGGATCCAAGATCAAAAGTCCCACATTATAAAGGAAAGTTTTTGGATGTATATCAAGCCTTAGAAGTGGCAAGATATGATCTTCAGTACTGCGATTGGCGAGCTCGGCAAGATGTGCTTACCATCATGCTCCTCCATGAAAAGGTAGTGGAAGTTCTTAATCCTCTAGCACGCGAATACAAATCAATTGGCACAATGAAAAAGGAGCTAGCAGAGTTGCAAGATGAATTAGCAGAAGCACACAGACAGGTCCATGTATCGGAAGCAAGGGTTTCAACTGCTTTAGAAAAACTAGCTTTCATGGAAGAATTAGTAAATGACAGGCTGCTTCAAAGTAGAAGCACAACAGAAGTTTCCGAGGCATCTTCTTCGCCGAGTACATCTGCCAAATCTTTCAATGAAGAAAAGAAAAGGCTGCCCCGAAAAAGCTTGAATGTATCAGGTCCGGTTCAGTCATTCCATCCCAACTTGAAGAATTTCTGGTATCCTGTTGCTTTCACTACTGACCTAAAACATGATACCATGATCCCTATAGAATGTTTTGAGGAACCATGGGTTATCTTCAGAGGGAAAGATGGGAAACCTGGATGCGTTCAGAATACCTGCGCACACAGATCATGTCCTCTACACCTTGGTTCTGTAAATGAGGGTCGTATCCAATGTCCCTATCATGGTTGGGAGTACACCACCACTGGAAAATGTGAGAAAATGCCATCCACTCGACTGCTTAATGTGAAGATAAAGTCAGTTCCATGTTTCGAAAAAGAGGGTATGATCTGGATTTGGCCCGGCAGTGACCCCCCATCAGCCACACTTCCATCTTTATTACCTCCTCCTGGGTTCCAAGTTCATGCCGAGATTGTCATGGAACTTCCAATTGAACATGGGTTACTTTTGGACAACCTTTTGGATCTCGCACATGCCCCATTCACACACACTTCAACCTTTGCTAAGGGATGGAGTGTCCCAAGCTTGGTGAAATTTTTGACACCTGGATCTGGTCTGCAAGGGTACTGGGATCCCTATCCAATTGATATGGAATTTCGGCCACCTTGCATGGTTCTATCGACGATTGGAATTTCAAAGCCTGGGAAACTCGAGGGACAAAACACTAGTCAATGCGCCACACATCTGCACCAACTTCATGTCTGCTTACCATCATCAAAACAAAAAACAAGACTACTGTACAGAATGTCGCTGGATTTTGCTCCTTTTCTAAAGCATGTTCCTTTTATGCAATATCTATGGAAGCATTTTGCAGAACAGGTTTTAAATGAGGATCTACGGTTAGTGCTGGGTCAGCAAGAGCGGATGAACAGTGGTGCAAATGTATGGAATTGGCCGGTATCGTATGACAAGCTTGGGGTAAGGTACAGYATATGGCGAGATGCCGTGGAGCYAGGAGCGAAACAGCTYCCCTTTAGTKGATAG 1587 0.4405 MNAIATASALTLPIFCRTAKLDSKKGLKGKFSVLAVFGEVEKKNAWSAIFDVEDPRSKVPHYKGKFLDVYQALEVARYDLQYCDWRARQDVLTIMLLHEKVVEVLNPLAREYKSIGTMKKELAELQDELAEAHRQVHVSEARVSTALEKLAFMEELVNDRLLQSRSTTEVSEASSSPSTSAKSFNEEKKRLPRKSLNVSGPVQSFHPNLKNFWYPVAFTTDLKHDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRSCPLHLGSVNEGRIQCPYHGWEYTTTGKCEKMPSTRLLNVKIKSVPCFEKEGMIWIWPGSDPPSATLPSLLPPPGFQVHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPGSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTSQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPFLKHVPFMQYLWKHFAEQVLNEDLRLVLGQQERMNSGANVWNWPVSYDKLGVRYSIWRDAVEXGAKQLPFSX* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1504 528 Coils Coil 108 142 - -
Amo17g1504 528 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 69 527 - -
Amo17g1504 528 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 69 527 - -
Amo17g1504 528 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 213 313 IPR017941 GO:0051537
Amo17g1504 528 Pfam Pheophorbide a oxygenase 400 495 IPR013626 GO:0010277
Amo17g1504 528 MobiDBLite consensus disorder prediction 168 182 - -
Amo17g1504 528 Gene3D - 207 329 IPR036922 GO:0051537
Amo17g1504 528 Gene3D - 331 523 - -
Amo17g1504 528 Pfam Rieske [2Fe-2S] domain 213 294 IPR017941 GO:0051537
Amo17g1504 528 SUPERFAMILY Bet v1-like 309 514 - -
Amo17g1504 528 SUPERFAMILY ISP domain 209 317 IPR036922 GO:0051537
Amo17g1504 528 MobiDBLite consensus disorder prediction 168 188 - -
Amo17g1504 528 CDD Rieske_RO_Alpha_Cao 196 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1504 Amo-Chr17 54992819 54997832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1504 K13600 - gmx:100806298 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1504 17 54992819 54997832 Amo17g1504 17 54992819 54997832 ECH