Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1412 ATGGGTGTCTCTTTCCTTTCAACTCTTCCTTCTCTTCTTCCACTTGCTCATGATTCACCACCTACTACCACCACCACCACCATCAGACACCACCCTCGTTTAGTAACAATTTGTGGTTATAATAAAATCAAAGCCAGTTATCATGTTATTGACGAAGGACATTTCAGTTTGAAAAGAAGAGACATTCTTAAATCCCTTGGGATGACTATTGGCTTGGAATTGATAGGAAGCTCTGGATCCCTTGTTGGAACTGCTAATGCCGCTGATTTGATACAGCGCAGACAGCGTTCTGAATTCCAGTCGAAGATTAAGGGAACTCTTTTTACAGCCATAAAGGGAAATCCTGATCTAGTTCCATCCTTGCTAACACTGGCTTTAAATGATGCTGTGACCTATGATAAGGCAACAAAATCGGGTGGCCCGAATGGCTCTATACGATTCAGCTCAGAAATAAGTAGACCTGAAAATAGGAGACTATCTGGTGCCTTGAGTTTAATAGAGGAAGCAAAAAAGGAGATAGATTCATATTCAAAAGCTGGACCCATATCATATGCAGATCTAATCCACTATGCAGCACAAAGTGCTGTTAAGTCTACATTTATAGCTGCTGCGATTCGAAAATGTGGTGGAAATGAGGAGAAAGGGAATTTACTGTACACTGCATATGGATCAAATGGGCAGTGGGGACTGTTCGACAAGCAATTTGGTAGGGAAGATGCTCAAGAGCCGGATCCAGAGGGGAGAGTTCCCTTATGGGAGAAAGCAAGTGTTCAGGAAATGAAAGACAAGTTTTCTGCTGTAGGCCTTGGTCCTCGCCAGCTGGCTGTTCTMTCTGCATTCTTAGGCCCTGATCAGGCTGCGACAGAGGCCAAATTGGCCTCCGATAAAGACGTTGCTCCATGGGTTGATAAATACCAACGGAGCCGCGAAACAGTCTCGCAGACTGATTATGAGGTTGATCTGATTACCACTTTCACAAAATTGAGTACATTGGGCCAACAAATCAACTACGAGGCATATACATATGCTCCTCCAAAGATCGACATTACCAAACTCAAATTGTAG 1065 0.4338 MGVSFLSTLPSLLPLAHDSPPTTTTTTIRHHPRLVTICGYNKIKASYHVIDEGHFSLKRRDILKSLGMTIGLELIGSSGSLVGTANAADLIQRRQRSEFQSKIKGTLFTAIKGNPDLVPSLLTLALNDAVTYDKATKSGGPNGSIRFSSEISRPENRRLSGALSLIEEAKKEIDSYSKAGPISYADLIHYAAQSAVKSTFIAAAIRKCGGNEEKGNLLYTAYGSNGQWGLFDKQFGREDAQEPDPEGRVPLWEKASVQEMKDKFSAVGLGPRQLAVLSAFLGPDQAATEAKLASDKDVAPWVDKYQRSRETVSQTDYEVDLITTFTKLSTLGQQINYEAYTYAPPKIDITKLKL* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1412 354 CDD plant_peroxidase_like 101 343 - -
Amo17g1412 354 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC 81 353 - -
Amo17g1412 354 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 81 353 IPR044831 GO:0004601|GO:0034599
Amo17g1412 354 Pfam Peroxidase 106 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo17g1412 354 Gene3D - 85 253 - -
Amo17g1412 354 PRINTS Plant ascorbate peroxidase signature 118 133 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo17g1412 354 PRINTS Plant ascorbate peroxidase signature 136 146 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo17g1412 354 PRINTS Plant ascorbate peroxidase signature 150 174 IPR002207 GO:0004601|GO:0006979|GO:0020037
Amo17g1412 354 Coils Coil 159 179 - -
Amo17g1412 354 SUPERFAMILY Heme-dependent peroxidases 86 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo17g1412 354 Coils Coil 347 354 - -
Amo17g1412 354 Gene3D - 254 319 - -
Amo17g1412 354 ProSiteProfiles Plant heme peroxidase family profile. 103 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1412 Amo-Chr17 46311061 46317647 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1412 K00434 - gmx:100795192 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1412 17 46311061 46317647 Amo17g1412 17 46311061 46317647 ECH