Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1411 ATGCAGAAGCGAAAGTGTGTTTCGGTGGTGCAACTGAGGAAGCTTCTTACTGCAGCAATATGCTCAATAGCGTTCATGGCTCTTGTCTCTGTTCATGTCCAGCACGTCGTTCCTTCTTCCAATGATCAGAAGTTCAATGACAAGATCACAACGACTCGAGATCTGCAAAGGTGGACAAGAGAGCTGGCTCCGCCTCATTTATCAAAAGTTCTGTTTCCTCCTCCAAAGTCGAACGTTTCAAGAGGGGTTTCGGATTATGAGAAGTTGTGGAAGCCTCCATCCAATCGTGGGTATCTGCCCTGTACAAAGCCTACACCTAATTATACAGCTCCTGCTGAGTCAAGAGGATACCTTCTAGTTCATACAAATGGTGGTCTCAATCAAATGCGTGCTGGGATATGTGATATGGTAGCTGTAGCTCGTATAATAAATGCCACTCTTGTAGTTCCTGAACTTGATAAAAGATCATTTTGGCAAGACACTAGCAATTTCTCTGATGTTTTTGATGAAGAGCATTTTATACGTTCTCTAGCTAATGATGTGAAGATAATTAAGAAGCTTCCCCAAGAACTGGTTAATGAAACCAGAATTGTGAAGTACTTCATAAGCTGGTCTGGTATGGATTATTATGAGAATGAGATTGCTACCTTGTGGGAAGAATACCAAGTTATTAGAGCAGCAAAATCTGATTCACGTTTAGCAAACAACAACCTACCTGCAGACATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTCCGATTTTCACCTTGCATTGAACAAATGGGAAAATTGTTGGTGGAAAGGATGAGGTTATTTGGTCCTTATGTTGCACTGCATTTACGTTATGAGAAGGATATGCTTGCATTTAGTGGATGCACACATGATTTATCTCAAGATGAGGCTGAAGAGCTACGGATAATCAGAGAGAACACTTCATATTGGAAAATAAAGGAAATTGATCCCGTAGAACAAAGGTTGAAAGGATTTTGCCCCTTAACTCCAAAGGAAGTTGGAATTTTTCTTACTGCTCTCGGATACCCATCAAAGACACCGATATATATTGCATCTGGAGGGATATACGGCGGTGAGTCCCATATGGCTGAACTGCGTTCCCGCTATCCATTGCTAATGAGCAAGGAAAAGTTGGCATCCATTGAGGAGCTGGAACCCTTTTCTAATCATGCATCTCAAATGGCTGCTCTTGACTATATTGTATCTATCGAAAGTGATGTATTTATACCATCTTATTATGGAAACATGGCAAAGGCTGTTGAAGGTCATCGTCGATTTCTTGGACGTGGAAGATCAATATTACCAGACAGGAAAGCCCTTGTTCGTCTTTTTGATAAACTGGCTCAGGGAACAATGACCGAGGGGAAAAGTTTGTCAAACAAGATAATTGATCTCCACAGAAGGCGGCTTGGATCCCCAAGGAAGAGGAAAGGGCCAATATCTGGTACAAAGGGCATGGATAGGTTTCGGTCAGAAGAAGCATTTTACTCTAATTCATTACCTGATTGTTTATGCCGAACCGGGCCGCTGCATCCAAACACTGCCTCTCACGTTGTTAGATAG 1581 0.4225 MQKRKCVSVVQLRKLLTAAICSIAFMALVSVHVQHVVPSSNDQKFNDKITTTRDLQRWTRELAPPHLSKVLFPPPKSNVSRGVSDYEKLWKPPSNRGYLPCTKPTPNYTAPAESRGYLLVHTNGGLNQMRAGICDMVAVARIINATLVVPELDKRSFWQDTSNFSDVFDEEHFIRSLANDVKIIKKLPQELVNETRIVKYFISWSGMDYYENEIATLWEEYQVIRAAKSDSRLANNNLPADIQKLRCRACYEALRFSPCIEQMGKLLVERMRLFGPYVALHLRYEKDMLAFSGCTHDLSQDEAEELRIIRENTSYWKIKEIDPVEQRLKGFCPLTPKEVGIFLTALGYPSKTPIYIASGGIYGGESHMAELRSRYPLLMSKEKLASIEELEPFSNHASQMAALDYIVSIESDVFIPSYYGNMAKAVEGHRRFLGRGRSILPDRKALVRLFDKLAQGTMTEGKSLSNKIIDLHRRRLGSPRKRKGPISGTKGMDRFRSEEAFYSNSLPDCLCRTGPLHPNTASHVVR* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1411 526 PIRSF UCP009360 1 513 IPR024709 -
Amo17g1411 526 Pfam GDP-fucose protein O-fucosyltransferase 117 432 IPR019378 -
Amo17g1411 526 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 4 522 - -
Amo17g1411 526 PANTHER OS02G0726500 PROTEIN-RELATED 4 522 - -
Amo17g1411 526 CDD O-FucT_plant 117 438 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1411 Amo-Chr17 46285895 46291184 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1411 38 515 Miscellaneous Gene Families AT1G22460 65.900 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1411 - - gmx:100795727 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1411 17 46285895 46291184 Amo17g1411 17 46285895 46291184 ECH