Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1312 ATGGTTGAAACTGATGGAAGTGAAGAACAACCAAACCAGTCATCCACCATGAAGACAACTAAAATTTTTGGTCTCATTACAAACTCCATATTTCTGGGCTTAGGCACCTCCGGCGGCCCACTCGTTATGCGCCTCTACTTCATACACGGCGGAAAACGCATCTGGCTCTCTAGTTTCCTCGAAACCGCCGGCTTCCCTGTCATGCTCATTCCCCTTTCCATTTCCTATATACATCAAAGATGCAACAAAACAACCAACTCTGMAAAACCAAAGCTTATCTCTATGGAGCTTTMTCTGTTTCTTGCCTCCGCTATAGTAGGCATCCTCACCGGCCTCGACGACTACCTCTATGCCTACGGTGTATCTCTTCTTCCAGTGTCCACTTTTTCTCTTATTCAGGCCTCCCACCTCTCTTTCACTGCCGTCTTCGCTTTCCTATTGGTGAAGCAGAAGTTCACGGCTTATTCGGTGAACTCCATAGTTTTGTTGACCATTGCCGCTGTGGTTTTGGCGCTACGGTCCAGTGGGGACCGTCCTCACGGTGAGTCCACTGGGAAGTACATAGTTGGTTTTCTTATGATTGTAGCCGCGGCTGCATTATACGGGTTTGTTTTGCCTCTTGTGGAGTTGGTTTACAAGAAGACCAAGCAACATATCACTTATTCTTTGGTCATGGAGATTCAGTTCGTTATGTGCTTCTTTGCCACTTTTTTCTGCACTATTGGGATGATAATAAATAACGACTTTAAGGTGATTCCACGAGAAGCTAGAGATTATGAGCTTGGAGAAACAAAGTACTATTATGTGTTAGTGTGGAGTGCTATGATGTGGCAATTTTTCTTCTTGGGAGCAATAGGGGTTATCTTCTGTGCCTCGTCATTGTTGTCTGGGATTATAATTGCCGTGTTTCTGCCTGTTACTGAAGTGTTGGCTGTGATCTTGTACAAGGAGAATTTTGAAGCAGAGAAGGGGGTTGCTCTGGTACTTTCTCTGTGGGGCTTCGYGTCCTACTTCTATGGAGAGATCAAACAAGAATGGAAGAGGAACAAAAATCACCGCCTCAATACAGAGCAAGCTCAGTGTCCCCCTCKCTCTCTTATTCCATGA 1107 0.4517 MVETDGSEEQPNQSSTMKTTKIFGLITNSIFLGLGTSGGPLVMRLYFIHGGKRIWLSSFLETAGFPVMLIPLSISYIHQRCNKTTNSXKPKLISMELXLFLASAIVGILTGLDDYLYAYGVSLLPVSTFSLIQASHLSFTAVFAFLLVKQKFTAYSVNSIVLLTIAAVVLALRSSGDRPHGESTGKYIVGFLMIVAAAALYGFVLPLVELVYKKTKQHITYSLVMEIQFVMCFFATFFCTIGMIINNDFKVIPREARDYELGETKYYYVLVWSAMMWQFFFLGAIGVIFCASSLLSGIIIAVFLPVTEVLAVILYKENFEAEKGVALVLSLWGFXSYFYGEIKQEWKRNKNHRLNTEQAQCPPXSLIP* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1312 368 PANTHER OS09G0467300 PROTEIN-RELATED 7 359 IPR030182 GO:0015211|GO:0016021
Amo17g1312 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 98 175 - -
Amo17g1312 368 Pfam Purine nucleobase transmembrane transport 25 345 - -
Amo17g1312 368 PANTHER PURINE PERMEASE 7 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1312 Amo-Chr17 40422948 40424855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1312 35 362 Organic Solute Cotransporters AT1G28230 58.507 1.25e-134 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1312 - - gmx:100804831 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1312 17 40422948 40424855 Amo17g1312 17 40422948 40424855 ECH