Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1296 ATGACAACAAGCAAATCAAGTAATGAAACTGCTGCTTCAGAACAACTCAACAACAATACAGAGTGTTGCATGTGCGGGGATCTTGGCTTCTCTGACCAGCTTTTTCACTGCAAAGTCTGCCAATTCAGATCTCAACACAGATATTGCAGCAATTTGTACCCGAAAGATGAGGCGTGTGAAACGTGCAATTGGTGTTTGAGTCAGAAAGAGAACACAAAAGAGAAGTCACCGAATTCGTCAAATTCTTCATCTTCTCATCACAGGAACAACGACGAGGGAAACAAGAACAAGAAGCTCATCAAGAAGCTCCAAATTCAGAAACCAATGATTAAGAAACCAAAGTCTCCGTCAGATCATCAGTCATCAAGATCACCACCACCACCATCGCCTTCACCGTCGGTTATGACACCGACACGGAAGAGAATCGTGACCAACCGTGCCTTGGAGGAAAGGCTGAGGAGGACCAAGTCAGAAGGGGTAATAGCGGCGGTTAGAAATGGTGGCGCCACCAAACAGGTCTTTAGGAATAAGGTCAGAAGGTACAAGCTTTTGGATGAGGTTTCAAGTTGA 570 0.4509 MTTSKSSNETAASEQLNNNTECCMCGDLGFSDQLFHCKVCQFRSQHRYCSNLYPKDEACETCNWCLSQKENTKEKSPNSSNSSSSHHRNNDEGNKNKKLIKKLQIQKPMIKKPKSPSDHQSSRSPPPPSPSPSVMTPTRKRIVTNRALEERLRRTKSEGVIAAVRNGGATKQVFRNKVRRYKLLDEVSS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1296 189 MobiDBLite consensus disorder prediction 71 87 - -
Amo17g1296 189 MobiDBLite consensus disorder prediction 120 134 - -
Amo17g1296 189 PANTHER EXPRESSED PROTEIN 8 189 - -
Amo17g1296 189 MobiDBLite consensus disorder prediction 71 141 - -
Amo17g1296 189 PANTHER EXPRESSED PROTEIN 8 189 - -
Amo17g1296 189 SUPERFAMILY FYVE/PHD zinc finger 11 71 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1296 Amo-Chr17 39086451 39088099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1296 - - adu:107459249 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1296 17 39086451 39088099 Amo17g1296 17 39086451 39088099 ECH
Amo17g1296 17 39086451 39088099 Amo07g1815 07 53872912 53874771 hybridization