Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1212 ATGGAGGAGAGGGTATTTGATACCCTCAGAACCCTGCAAGATGAAGGGGACTCGTTTGCGACGAGGGCAGAAATGTATTACAAGAAGCGGCCGGAGCTGGTGAGTTTTGTAGAAGAAAGCTTCCGATCATACAGAGCCTTAGCAGAGCGGTATGATAAACTTTCAAAGGACCTTCAAAGTGCGAACCGCACTATTGCAAGTGTGTTCCCAGATCAAGTTCATTATAGGACTGAAGAAGAAGAAGAAGACGACGATGATGAAGAAGAAGAAGAGAAAGGATCAAATGATGCATTATCACCAAAATCTAACAATGGAAGAAGCACTAATAATAATAATAACAATGAAGCATTGATACCTAAAGTTCCAAATATCCCAAAGAAGGGTTGTTTCAGAAGTCCATCCATGTTGCTCTCGAGAAAAGGATCACTGCCAAAGAGGACTACAAGCCCTTCCGGAAAAGATTTCAAAGTTTCAGGTTCCGGTTTGTCGAAGGAACAAGCACTCGGTGAAATTGACAAGCTTCAGAAAGATATTTTGACACTTCAGACTGAGAAAGAGTTTGTTAGGAGTTTGTATGAGCGCGCCTATACACAGTATTGGGAAATCGAGGATCGGATCACGGCAATGCAAAAAAGTGTCAGCAGATTGCAAGATGAGTATGGTGTTGGAACCGTCATCGAAGACAACGAAGCTCGAACTTTAATGGCGGCCACTGCTCTAAAGTCTTGTCAAGTTACTTTAGCTAAGTTGCAGGAGATTCAAGCACAATCATCCGAAGAAGCTAGAGTTGAGTTTGAAAGAGTTAAGGAAGCTCATGAGATGTTTGAGTCTCTTAGAGACAAATTCATCTCTAAATATATGAACCAAGATGAATCCAAGATTGTAACACCAGTAAGTCCAGTAGAAGAAGAAAAGGACATGGATGATGCCGAGATTCAAGCGAAAGTTAACGAAAATAAATTGGAGGAAGATTCAAGTGAAGTCATCACTGTGACTGAAATGGCCGATAAGATTAATCAGCTTGTCAGTAAGGTTGTTACATTGGAAACCACCGTTTCGTCTCAAACAGGTTTGGTGCAGAGATTGAGATCAGAAACAGATGAACTTCAGACAAATATAAAGAAGTTGGAAGAGGAGAAGGATGGTTTGATAGAAGGTTCGGAAGTTACAAACCAAAAGCTGAAAGAAGTGGAGGAAGAATTGAGGAGAGTAAAGCTTTTGAACCGAAGCGTCCGAAGCCAAGACAATACAATCAAAGCACACTTCGTTGAGGCTAGTTATGACATTAAACACCTTTCTGAAAAACTGAATAACATGAAGCCAGATGTGGAGGAAGAAAATATGGTACTGTACAAGAACGAGAACAATAATGATCTTGATGGTAAACAAGGAAATGAATCCCAAATTTTCGATGAGAATGTCACGACATTAAAAGAAGAAGATGGCGGAGATGTGACTCCGGAAAGGATTCAGAATATGGGTGGTGACGGTGGTGAAATTGAATCACATGATTTGCAGAGTGTTGATGGTAAGGGAGATGAACCTGACTGGAGGCAATTGTATATAAGTGGATTAGATGATAGAGAAAAGATTCTGCTGGAGGAGTATACTTCTGTTTTAAGGGACTATAAGGATGTAAAGATTAAGCTTAATGATGTGGAGAAGAAAAACCGGGATAGCATTTTTGAATTAGCACTTCAGCTAAGGGAATTGAAGAATGCATTAGCCAACAAGGACCAAGAGATAATCTATTTACATCAAAAGCTTAACAGTCCAAATTCAGCTGGTGATAATTCTGATGTAAGTCCATTCACCATGGCAACAGAGTACAAATACACACCGAACGAAGCTCTTCTTCGAGAAGCCGAAGCGCAAGAAGCTAACTTGCCGACGGTCCTTGAAAAGAATTCGCCATTAATTACTTCAGATGCGAATCCAATAAAAAGTCCTTCTTCAGAAACCACACCGGTGGAAGATGATTCGTCGCATCTGAAAATGAGTCAGGGAAGGCTGGAAGGGCTATCAACTATAGAGAAGAAATTCCGCTCTGACATGGATGACATTCTAGAGAAGAGTCTTGAATTCTGGCTCCGATTTGGCACTTCTATTAACCAGATTCAAAAGTACCAGAATTCAATCCAGGACTTAAAAGCCGACCTRTGCCACATACAAGAAAGTCATACAAGATCGTCCTCGGAAGGACATTCTTCTAAAAGAACGCATTTACAGTCACAACTTAAGCCGATATTCAAACACCTGCGGGAGATAAGAACRGAGTTATCGCTGTGGCTCGAACACAACACGGTGTTGCAGGTTGAGATGCAGGATAGGAACTCTTCCTTGTGCCACTTGCATGATGAAATAATTAGAGCAAGCAACAATAATGGAGAAGAAGAGAASGAGGGAGAGCTAACGATAAGTCCTTATCAGGCTGYTAAGTTTCAAGGTGAGATTATGAACTTGAAACAACAGAACAACACTGTTGCAAGTGAGCTTCAAGCAGGTCTAAGCCTTGTGAGTGGGATGAAGAATGATGTTGAGAAAACACTTGATGAGCTTGACCATATTATTGCCCCCAACAAGAAAAGCAGTAGCCATGGAAGCTCCAAAAATGATTCGGGGCGACCTCGGGTACCATTGAAGTCTTTGTTGTTTGGAGCGAAGTTGAAGAAGCATAAGCAAAAACAATCGCTATTTGCATGTGTAAATCCCACCGTGCGTAAGAGTGACATGGAAGATGAGGCTGGATCTCCAATACATACACTGCAACATTGA 2775 0.4119 MEERVFDTLRTLQDEGDSFATRAEMYYKKRPELVSFVEESFRSYRALAERYDKLSKDLQSANRTIASVFPDQVHYRTEEEEEDDDDEEEEEKGSNDALSPKSNNGRSTNNNNNNEALIPKVPNIPKKGCFRSPSMLLSRKGSLPKRTTSPSGKDFKVSGSGLSKEQALGEIDKLQKDILTLQTEKEFVRSLYERAYTQYWEIEDRITAMQKSVSRLQDEYGVGTVIEDNEARTLMAATALKSCQVTLAKLQEIQAQSSEEARVEFERVKEAHEMFESLRDKFISKYMNQDESKIVTPVSPVEEEKDMDDAEIQAKVNENKLEEDSSEVITVTEMADKINQLVSKVVTLETTVSSQTGLVQRLRSETDELQTNIKKLEEEKDGLIEGSEVTNQKLKEVEEELRRVKLLNRSVRSQDNTIKAHFVEASYDIKHLSEKLNNMKPDVEEENMVLYKNENNNDLDGKQGNESQIFDENVTTLKEEDGGDVTPERIQNMGGDGGEIESHDLQSVDGKGDEPDWRQLYISGLDDREKILLEEYTSVLRDYKDVKIKLNDVEKKNRDSIFELALQLRELKNALANKDQEIIYLHQKLNSPNSAGDNSDVSPFTMATEYKYTPNEALLREAEAQEANLPTVLEKNSPLITSDANPIKSPSSETTPVEDDSSHLKMSQGRLEGLSTIEKKFRSDMDDILEKSLEFWLRFGTSINQIQKYQNSIQDLKADLCHIQESHTRSSSEGHSSKRTHLQSQLKPIFKHLREIRTELSLWLEHNTVLQVEMQDRNSSLCHLHDEIIRASNNNGEEEXEGELTISPYQAXKFQGEIMNLKQQNNTVASELQAGLSLVSGMKNDVEKTLDELDHIIAPNKKSSSHGSSKNDSGRPRVPLKSLLFGAKLKKHKQKQSLFACVNPTVRKSDMEDEAGSPIHTLQH* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1212 924 Coils Coil 307 327 - -
Amo17g1212 924 Coils Coil 561 581 - -
Amo17g1212 924 MobiDBLite consensus disorder prediction 639 657 - -
Amo17g1212 924 Coils Coil 44 64 - -
Amo17g1212 924 Coils Coil 359 414 - -
Amo17g1212 924 MobiDBLite consensus disorder prediction 639 669 - -
Amo17g1212 924 MobiDBLite consensus disorder prediction 141 156 - -
Amo17g1212 924 MobiDBLite consensus disorder prediction 70 160 - -
Amo17g1212 924 Coils Coil 164 184 - -
Amo17g1212 924 PANTHER PROTEIN NETWORKED 2D 1 909 - -
Amo17g1212 924 PANTHER PROTEIN NETWORKED 2A 1 909 - -
Amo17g1212 924 MobiDBLite consensus disorder prediction 858 879 - -
Amo17g1212 924 MobiDBLite consensus disorder prediction 77 93 - -
Amo17g1212 924 Pfam KIP1-like protein 1 52 IPR011684 GO:0003779
Amo17g1212 924 MobiDBLite consensus disorder prediction 479 512 - -
Amo17g1212 924 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 58 IPR011684 GO:0003779
Amo17g1212 924 MobiDBLite consensus disorder prediction 97 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1212 Amo-Chr17 35015291 35018979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1212 - - mtr:MTR_5g066340 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1212 17 35015291 35018979 Amo17g1212 17 35015291 35018979 ECH