Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1209 ATGGAAGTTACTCCTGCTAATTTCGTGATTGCGTTCTTCTCATTTTGTTTTACAGCGTTTTTCACGTTTTTATTTGTTTGTGCATTCTCGGTTTGGATTGTGAGTAAGATTTTGGGTGCAAGAGTTGGATTTCGTGTTGGTGGATGTAATCGTATAAGAGACATTGTCGTGAGGTTTAATAAGGGTGCTGTGGAATCTGTATATGTTAGTGAAATTAAAATCATCTTGCGTCATTCCTTGGTTGAACATGTTGCCGGTGTTAGTTCTTTGGATCCAAAATTGCAACTATCAATATGCAAGTTAGAAGTTGTTACGAGACCTTCTATTAAAAGCCCTGCAAAGAAGAAAACTCAGAAGTCCCGTGCTCGTAGTTCAAGCAAGGGAAAGGGAAAGGGAAAGGGGAATAAAAAGTGGATAATGATAAGCAACATTGCCAAATATTTGTCTGTTTGTGTGACAGATATAGTTCTAAAGACACCTAAATTTGCACTTGAGATAAGGGAGTTGAATGTGGATATATCTAAAGATCAAGGGTCTGAAACAAAATTGTTTGTTAGGGTAAACATTTTGCCCATTGGTGTTCGTATTCATGGGCCTCAAATGGGTGATCAATTGTCCAATCCTACAAGAAAAGGGTACATAGCTCCTAACCAAGCATCTGCTACAGCTGCAGAAAAGTCTTCTGGTTCTTTTATGTGTGAAAAATTCAACGTTTCATGTGAATTTGATCATAATAGTGAAGTAGGTACCATTATTAAGAATGTGGATATTTCTATTGGAGAGATCATGTGGAAATGTACGGTGTCAGTTCCTGAGGTGACAATAATGCTTTTTGATATGGCTGGATCTCCGGCGTACTATGGTTGCTTACAATCATCGCATCTAGTTGCAAACAACATTTCACATATGGGGACTACTGTACACTTTGAACTTGGTGAAATAAATCTTAGCTTGGATGATGAATATAAAAAGTGCCTGGAAGAAAGCTTTCTTGGCATGGAAACAAACTCTGGCTCCATTATGCAAATTACAAAGGTCAGTTTGGACTGGGACAAAATGGACACGAAATCCTCCGAAGAAGACAGTTCTAAGGGTATGCAAAGTTTATCAGTTACTATAAATAATGTGCGAGTTGTTGTATCTGTAAAGCGTGTAGAACCATTAATAGCAGTAGCAATGCCCTTGCAAGCATTATTAAAAAGCTTATCTGCTTCAAAGAAGAAATCAACTCAGATCACAAAGCCTCCTCCACCAAAACCTCCGTCTGGAAAGGGAGCTAAATTGGTGAAATGCAATCTGGAACAATGTTCACTGTATATATTTGGGGAGACCGAATTGGAAAATGCAGTTATTCCAGATCCCAAGCGAGTCAATTATGGTTCACAAGGTGGTAGGATTGTAATAACCGAATCAGCTGATGGTACCCTGCGCACTGCAAGCGTAATGTCCAATAGTGAATACCCAAAGCTTAAGTACTCTATCTCTCTTGAAATTGTTCATACAAAGTTGTGTTTAAATAAGGAAAAACAATCCACTCAAATAGAACTTGAAAGGACTCGATCCAATTATGAGGAATACATAGAGGAAAATGATAGGCCAGTGACAAAGGTGGCTTTATTTGATATGCAGAATGCCAAGTTTCTACAACGCTCAGGTGGCGTTAAAGAGAATAGTACCAGGTCACTTTTTAGTGTTACTGACATTACTGTGAGGTGGGAGCCCGATTTACAAATATCACTGATGGATTTTGTTCTTCGATTGAAATCTGTAATGCATAATAGCAAGCTTCAGGAGCAAGAAATGCTAAATATATCTGCTGGGTTGGGAGATGGAGTTGAAGCAACAGTTAAGGTGCAATCAATTTTCTCTGAGAATGCTCGCATAGGAGTGCTCCTCGAAGGACTTATGTTTGGTTTTAATGGGGCTAGAATCATCAAGAGTAGTCGAATGCAAATTTCACGAATTCCTAGTAAATCTATTAGCTCATCTATTGGCCCAACCTTGGATTGGGTAATTCAAGGACTTGATATCCAAATTTGTATGCCATATAGACTGCAACTCCGAGCTATTGATGATGCTCTTGAGGATATGTTGAGAGCTTTGAAGCTAATTATTGCTGCTAAGACTAGTATAATTTTTCCTGTGAAGAAAGAGAGTTCTAAAGTCAAGAAACCTAGTTCAGGGGTAAAGTTTGGATGCCTAAAGCTTTTCATACGCAAGCTAACTTTTGATATTGAGGAAGAACCTATCCAAGGATGGCTCGATGAACATTATCATCTGCTAAAAAGGGAAGTGGGCGAGCTAGCTGTTCGGATGAACTTCCTTGATGAATTTGTATCAAAGGCCAATCAAGGGTCGAAATCTAATAATGATGATACTACTACTGTTAATTCTTCTCAAGGAAAGAATGTTGATGGTAATGATATTGAAGTTAATGCAAGTGACTCTTCAACTATTAATTCTATGAGGGAAGAAATTTATAAACAATCATTCCAACAATACTATCAGGCATGTCAGAGCCTAGTGTTATCAGAAGGTTCAGGTGCTTATAAAGATGCTGGCTTTCAAGTTGGTTTCAAACCGAGTGCTTCAAGGATTTCCCTTTTGACGTTATCTGCATCAGACTTGGATGTAACCTTGACAAAAATTGATGGTGGAGAAGATGGGATGATTGAACTTCTAAAGAAGCTTGATCCTATCATTCTTAAACATAATATACCATTTTCGCGAATGTTTGGAGCAAACATTGTCTTACGCACTGCTTCTCTTGTCGCCCAGATTCGTGATTACACATATCCTCTTTTCTCTGGAAGTTCTGGCAGATGTGAAGGCAGCGTTGTCTTAGCTCAGCAGGCAACCTTCTTTCAACCTCAAATGCTTCAGGATGTTTACGTTGGAAAATGGAGAAAGGTTTCCATGCTTCGATCACTTACTGGTACTACTCCACCAATGAAGTCATATTTAAATTTGCCAATACATTTTCAAAAGGGTGAAGTGTCATTTGGTGTGGGTTATGAACCCGTTTTCGCTGATATTAGTTATGCTTTCACAGTAGTAATGCGAAGGGCTAATCTAAGTGTCATAAAACCTGGTCCACTTATTTTGCCACCAAAAAAAGAGAAGAGTTTACCGTGGTGGGATGACATGAGAAACTATATCCACGGAAAAGTCTCTTTAACGTTATCTGAAACAAAATTTCATCTTTTGGCAACTTCAAATCCTTATGAAAAGCTTGATAAACTTGAAATTGTAACAAGCTCTATGGAAATTCATCAGTCAGATGGTAAAATTTATGCTTCTGCCAAAGATTTCAAGGTTCTAGTGAGCAGTTTGGAAAACTTGGCAAGTAAGCAAGGTTCTGAAATTCCAGCAGGTGTGTCTGGTGCATTTTTGGAAGCTCCATTCTTTATTCTTGATGTTAGAATGGATTGGGATTGTGACTCTGGGGACCCCATGAATCATTTCTTATTTGCACTTCCAGCTGAGGGAAAGACTCGGGAGAAAGTATTTGACCCATTTAGATCCACCAATTGGTCCCTTCGGATGGACATATATTTCAGCTCCTTTCTTCCTTCGTTTGAGAAACAATCCTCATCCTCAATGGCTGGAACCAATACCCGTCCTTCTCATAATGTTTCACCTGCTTACACAATTATCAAACTTGGTGCTCATGATCTTGCATGGCTTGTGAAATTTGGTAACGTGATGTACCTCCCTCCACATAAGTTACGTTTGTTCTCGCGTTTCCCTCGTTTTGGAGTTCCAAGGATTCTTAGATCTGGTAATCTTGCAATGGATAAAGTGATGACTGAATTTATGATCCGTATAGATTCCACACCAACTTGCATAAAGAACATCCCTTTCCATGATGACGATCTGGCCAAAGGATTAACCCTCACGATGAATAAGATGAAGTTTGAAGTATGTTTTAGTAGGGGTAGGCAGAAGTATGATTTTGAAAGCATTCGTGACCTTTTGTCAATTGTTTATGAAGGTGTCGACTTACACATGCCCAAAGCTTTTATAGATAAAGAAAACTCCACTAGCATTGCTAAATTACTAAACATAATACCAAAAACCTCTCAACCTTCAGCTGCATCTAAGGACAAAGCTAACTCTAAAGAAGGTGACATTGTCATACAAAAGAATAATGATGACGGGTTCATATTATCTTGTGATTACTTCATTATAAGGAGGCAGTCTCCAAAGATTGATCCTGCTAGATTACTAGCCTGGCAAGAAGCAGGAAAAAAATATGTTCAGCCAACCAATGTTCGGGGTCAACCTGAAAAAAGAAATGAAAGTGATGAGCATGAGCAGTCTGACCCAAGCGATGATGATGGTTACAGTGTGATAATAGATGACAATTGTCGTCGTGTGTTTGTGTATTGCCTTAAGATTTTATGGAACATTGAAAACAGAGATGCTGTTTGCTCCTGGATTGCTTGTCTAGCTAAAGCTGCTGCACCTTCCAAACCTTCTCCATCTCGACAGTATGCACGGAGAAAGCTTCTTGAGAAAACCAAACAACATGATGTGAGTACTAATGCAAACCAACAAGATCAGGGGGCTGAAAACCAGCAAAATAATGGAGCGAAAACCCATCAAGATGCAGTTGGAGTAGTTGAAAGCAATAAAGAATCAGAAGCTGAAACCCATCATGATGCTGCGATTGGAACTAAAACTAATAAGGATGATAGAGTTCAAGAAAACCATCAAGAGGAGATTTCTAAATGCCCTCCCGCTAGTAATATATCAGACTCTTCCTCTTTTCAAACCACTGAGACTTCTGGATCACTTCCAAAGCCACCAGATTTGACTAAGGTGGACAACTTGACACCTGCAAAAAAGGAAAATACAGAAGATTCAACAGAAGGGACTCGACATTTCATGGTGAATGTTATTGAGCCACAATTTAATCTGCACTCAGAGGATGCAAATGGTAGATTTTTACTTGCTGCTGTTAGTGGTCGTGTCTTGGCCCAATCATTTCAATCGGTCCTTCAAGTTGGTCAGGAAATGATTGAGCAACAACTTAGCACTAAAGAACTGCCTACTGTTGTACCTGAAATCGCTTGGAAAAGAACGGAGATGTCTGTTATGTTGGAGCATGTGCAGGCCCATGTTGCGCCAACAGATGTTGATCTTGGTGCTGGAGTACAATGGCTTCCAAAAATTCTTAGAGGTTCTCCAAAAGTAATGCGTACAGGTGCTCTTCTTGAGAGAGTTTTTATGCCTTGTGATATGTACTTCCAATACACGAGGCACAAAGGATGTACAAACGAACTCAAGGTGAAGCCCTTGAAAGAGGTTAAATTCAATTCTCACAATATAACAGCAATAATGACATCTCGCCAATTTCAAGTCATGATGGATGTACTAAGCAATCTTCTTTTTGCACGCATTCCAAAGCCTCAAAAAAGTAGCCTATCACTTTCTGTTGAAGATGATGATATTGTGGAAGAGGAAGCAGCAGATGAGGTGGTTCCTGATGGGATTGAAGAGGTTGAACTTGAAAAAATCAATCTTGAAGTGGTAGAGAGAAAACAGAGGTTGCTTATTGATGATATAGGGAAATTATCTCTTTGGTGCGACAATATTGGTGACCAGACTCTAGAAAAGGAAGATGAGTGCTGGATGATAGATGGTGGGATACCTTTGTTGATCCAAGAATTGAGAAAAGAACTTGTAGTTGCAAAGAAAGCAAGGAAGGAAGCATATGCATCTCTAAGAGTTGCTCTGCAAAAAGCTGCCCAATTGCAACTAATGGAAAAGGAAAAAAAGAGCAAAAGTCCCTCCCATGCCATGCACTTATCTTTGCAAATCAATAAAGTTGTTTGGAGCATGCTTATTCATGGTAAATCCTTTGCTGAAGTTGAGATTAATGACATGATTTACGACTTTGACCGGGATTTCAAGGATGTGGGCATTTCTCATTTCACAACAAAATACTTTGTTTTCAGAAATTGTCTGGCTAATGCCAAGTCTGATACAGTTTTGGCAGCTTGGAATCCTCCGTCTGAATGGGGAAAAAAAGTGATGCTTAGGCTTGATGCAAGACAAGGACAACCAAAGGATGGAAAAGCTCCCTTTGAACTTTTTCAGGTAGATATCTACCCCCTTAAGATCCATTTAACAGAGACAATGTACACAATGATGTGGGGGTATTTCTTTCCAGAAGAAGAACAACGTGATTCTCAACGTCGAAAGGAGGTTTGGAAGGTTTCAGCAACAGCTGGTGCAAGGCGTGCAAAGAAAGGTGATACCTCATCCTCAGCCCAAGCCGATTCAACTCAGGCATCCAAAGCTAAAAATACAAAGGAAGAAATATTGGCCGACTCTAGTGAGGATGAGGCACCTAAAAGCAAAACTAAAGGTTCTAAGCCTAGTGACGAGAAGAAGCCAAAAAAGATGATGGTTTTTCATGAAATCAAGATTAGCCAGGTTGAGTTATCGGTTACATATGAAGGATCAAGATTCGCCGTAAGTGATCTGAGATTACTAATGGATCAATTTCATCGGGTAGAGTTTGTTGGGAGTTGGCAAAGACTCTTCTCACGAGTTAAGAAGCATGTCATCTGGGGAGTCCTGAAATCTGTGACTGGAATGCAGGTTAAGAAATTTAAAGACAAAGGTCAAATTCAGCCCAGTGCAGCTAGTGGTCCAGAGATAAGGGAAAAAGACAATTCATCAGTAAAATCTGACCAGTCAGGTTTTCCGCGTCCAGCTGATGGAGCAGGTGATGGGTTTGTAACATCCATTAAAGGTCTATTTCACACTCAAAAGAAAAAAGCAAAGGCATTTGTGAACAAGACAAAGAAAGGTGAAGGAGAACAAGAGGCACAGGGATCAGATGTCAGTGAAAATGAAGCTGAAGCTTCTACATTTGCTAGGCAGCTTACGATTGTGAAAGCTAAAAAGCTTATTAAGCGACACACTCAAAAGCTCCAAGCTAAAGGACACAAAGCTTCATTCTCGAAAGAATCATTTCCACCAGCATCAGCATTGCAAACATCAACATCTCCTCAACAAGTGATTGACTCATTAGCATATGACAGTGATTCCTCAAGTGCATCTGAAGCCTATGAAGCATTAAGTGAATTGAACAAGCTTTAA 7116 0.3953 MEVTPANFVIAFFSFCFTAFFTFLFVCAFSVWIVSKILGARVGFRVGGCNRIRDIVVRFNKGAVESVYVSEIKIILRHSLVEHVAGVSSLDPKLQLSICKLEVVTRPSIKSPAKKKTQKSRARSSSKGKGKGKGNKKWIMISNIAKYLSVCVTDIVLKTPKFALEIRELNVDISKDQGSETKLFVRVNILPIGVRIHGPQMGDQLSNPTRKGYIAPNQASATAAEKSSGSFMCEKFNVSCEFDHNSEVGTIIKNVDISIGEIMWKCTVSVPEVTIMLFDMAGSPAYYGCLQSSHLVANNISHMGTTVHFELGEINLSLDDEYKKCLEESFLGMETNSGSIMQITKVSLDWDKMDTKSSEEDSSKGMQSLSVTINNVRVVVSVKRVEPLIAVAMPLQALLKSLSASKKKSTQITKPPPPKPPSGKGAKLVKCNLEQCSLYIFGETELENAVIPDPKRVNYGSQGGRIVITESADGTLRTASVMSNSEYPKLKYSISLEIVHTKLCLNKEKQSTQIELERTRSNYEEYIEENDRPVTKVALFDMQNAKFLQRSGGVKENSTRSLFSVTDITVRWEPDLQISLMDFVLRLKSVMHNSKLQEQEMLNISAGLGDGVEATVKVQSIFSENARIGVLLEGLMFGFNGARIIKSSRMQISRIPSKSISSSIGPTLDWVIQGLDIQICMPYRLQLRAIDDALEDMLRALKLIIAAKTSIIFPVKKESSKVKKPSSGVKFGCLKLFIRKLTFDIEEEPIQGWLDEHYHLLKREVGELAVRMNFLDEFVSKANQGSKSNNDDTTTVNSSQGKNVDGNDIEVNASDSSTINSMREEIYKQSFQQYYQACQSLVLSEGSGAYKDAGFQVGFKPSASRISLLTLSASDLDVTLTKIDGGEDGMIELLKKLDPIILKHNIPFSRMFGANIVLRTASLVAQIRDYTYPLFSGSSGRCEGSVVLAQQATFFQPQMLQDVYVGKWRKVSMLRSLTGTTPPMKSYLNLPIHFQKGEVSFGVGYEPVFADISYAFTVVMRRANLSVIKPGPLILPPKKEKSLPWWDDMRNYIHGKVSLTLSETKFHLLATSNPYEKLDKLEIVTSSMEIHQSDGKIYASAKDFKVLVSSLENLASKQGSEIPAGVSGAFLEAPFFILDVRMDWDCDSGDPMNHFLFALPAEGKTREKVFDPFRSTNWSLRMDIYFSSFLPSFEKQSSSSMAGTNTRPSHNVSPAYTIIKLGAHDLAWLVKFGNVMYLPPHKLRLFSRFPRFGVPRILRSGNLAMDKVMTEFMIRIDSTPTCIKNIPFHDDDLAKGLTLTMNKMKFEVCFSRGRQKYDFESIRDLLSIVYEGVDLHMPKAFIDKENSTSIAKLLNIIPKTSQPSAASKDKANSKEGDIVIQKNNDDGFILSCDYFIIRRQSPKIDPARLLAWQEAGKKYVQPTNVRGQPEKRNESDEHEQSDPSDDDGYSVIIDDNCRRVFVYCLKILWNIENRDAVCSWIACLAKAAAPSKPSPSRQYARRKLLEKTKQHDVSTNANQQDQGAENQQNNGAKTHQDAVGVVESNKESEAETHHDAAIGTKTNKDDRVQENHQEEISKCPPASNISDSSSFQTTETSGSLPKPPDLTKVDNLTPAKKENTEDSTEGTRHFMVNVIEPQFNLHSEDANGRFLLAAVSGRVLAQSFQSVLQVGQEMIEQQLSTKELPTVVPEIAWKRTEMSVMLEHVQAHVAPTDVDLGAGVQWLPKILRGSPKVMRTGALLERVFMPCDMYFQYTRHKGCTNELKVKPLKEVKFNSHNITAIMTSRQFQVMMDVLSNLLFARIPKPQKSSLSLSVEDDDIVEEEAADEVVPDGIEEVELEKINLEVVERKQRLLIDDIGKLSLWCDNIGDQTLEKEDECWMIDGGIPLLIQELRKELVVAKKARKEAYASLRVALQKAAQLQLMEKEKKSKSPSHAMHLSLQINKVVWSMLIHGKSFAEVEINDMIYDFDRDFKDVGISHFTTKYFVFRNCLANAKSDTVLAAWNPPSEWGKKVMLRLDARQGQPKDGKAPFELFQVDIYPLKIHLTETMYTMMWGYFFPEEEQRDSQRRKEVWKVSATAGARRAKKGDTSSSAQADSTQASKAKNTKEEILADSSEDEAPKSKTKGSKPSDEKKPKKMMVFHEIKISQVELSVTYEGSRFAVSDLRLLMDQFHRVEFVGSWQRLFSRVKKHVIWGVLKSVTGMQVKKFKDKGQIQPSAASGPEIREKDNSSVKSDQSGFPRPADGAGDGFVTSIKGLFHTQKKKAKAFVNKTKKGEGEQEAQGSDVSENEAEASTFARQLTIVKAKKLIKRHTQKLQAKGHKASFSKESFPPASALQTSTSPQQVIDSLAYDSDSSSASEAYEALSELNKL* 2372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1209 2371 MobiDBLite consensus disorder prediction 1508 1625 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 2208 2247 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 1540 1574 - -
Amo17g1209 2371 SMART Fmp27_GFWDK_2 929 1077 IPR019441 -
Amo17g1209 2371 PANTHER ANTIGEN MLAA-22-RELATED 600 2105 IPR045167 -
Amo17g1209 2371 PANTHER ANTIGEN MLAA-22-RELATED 9 262 IPR045167 -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 2076 2136 - -
Amo17g1209 2371 Coils Coil 509 529 - -
Amo17g1209 2371 Coils Coil 1889 1909 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 112 134 - -
Amo17g1209 2371 PANTHER LOCALIZATION AND RNA POL II PROMOTER FMP27 DOMAIN PROTEIN 600 2105 - -
Amo17g1209 2371 PANTHER LOCALIZATION AND RNA POL II PROMOTER FMP27 DOMAIN PROTEIN 261 599 - -
Amo17g1209 2371 PANTHER LOCALIZATION AND RNA POL II PROMOTER FMP27 DOMAIN PROTEIN 2121 2365 - -
Amo17g1209 2371 PANTHER LOCALIZATION AND RNA POL II PROMOTER FMP27 DOMAIN PROTEIN 9 262 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 2085 2101 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 1421 1449 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 1511 1535 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 109 134 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 2102 2136 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 1611 1625 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 2269 2292 - -
Amo17g1209 2371 Pfam RNA pol II promoter Fmp27 protein domain 980 1076 IPR019441 -
Amo17g1209 2371 PANTHER ANTIGEN MLAA-22-RELATED 261 599 IPR045167 -
Amo17g1209 2371 PANTHER ANTIGEN MLAA-22-RELATED 2121 2365 IPR045167 -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 783 815 - -
Amo17g1209 2371 Pfam Golgi-body localisation protein domain 1743 2199 IPR019443 -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 1576 1601 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 2316 2341 - -
Amo17g1209 2371 MobiDBLite consensus disorder prediction 406 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1209 Amo-Chr17 34811866 34841539 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1209 - - adu:107459337 3959.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1209 17 34811866 34841539 Amo17g1209 17 34811866 34841539 ECH