Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1162 ATGGGTACCGCTGCTGTAGATCAAAGTCTCTATCCATTGCATCGTTGCAAAACTATTCACTTGGTTAGGCATGCCCAAGGAATTCATAATGTTGAGGGAGAGAAAAACCATGATGCATATATGTCTGAGGATCTTTTTGATGCGCAACTAACACCTCTTGGTTGGAAGCAGGTTGCAAATCTGCGAAACCATGTCAAGTCTTGTGGACTTTCCAAAAGAATTGAACTAGTTATTGTTTCCCCCCTGTTGAGGACTATGCAAACAGCAGCTGGTGTCTTTGGTGGTGAAGCACATGCTGATGGGAATAAGGAAGCTCCTTTGATGACGCAAAATGTTGGAGATAGCAATCATCCTGCAATTTCTAGTCTTAACTCCCCACCATTTTTAGCAGTAGAGCTTTGCCGAGAACAAATAGGGAATCATCCTTGTGATAAGAGAAGAACCATCAGTGAATACCGGAATATGTTTCCAGCAATTGATTTTTCACTGATTGAAACTGAYGAGGACACCTGGTGGACTCCAGAAAGAGAGAMGAGAGAAGAAGTTACTGCTAGGGGACTGAAGTTTCTTGACTGGTTGTGGACACGCCAAGAGAAGGAAATAGCGATCGTTACTCACAGCAGTTTTCTGTTTAATACACTAAGTGTCTTTGGAAATGATTGTCACCCAAATGTGAAGAGCGAAATAGGCAAACACTTTGCCAATTGTGAGCTACGTTCAATTGTTCTGGTTGACAGAGGTATGATTGGATCAGATGAGTCWAGTACTAATTATCCTGGCAAGATTCCTTCTGGCCCTGATCTTCCCAGTGATCTTGCTGATGATAAGCATTCAGCCAATGGATCCACTAATTAA 855 0.4222 MGTAAVDQSLYPLHRCKTIHLVRHAQGIHNVEGEKNHDAYMSEDLFDAQLTPLGWKQVANLRNHVKSCGLSKRIELVIVSPLLRTMQTAAGVFGGEAHADGNKEAPLMTQNVGDSNHPAISSLNSPPFLAVELCREQIGNHPCDKRRTISEYRNMFPAIDFSLIETDEDTWWTPEREXREEVTARGLKFLDWLWTRQEKEIAIVTHSSFLFNTLSVFGNDCHPNVKSEIGKHFANCELRSIVLVDRGMIGSDESSTNYPGKIPSGPDLPSDLADDKHSANGSTN* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1162 284 CDD HP_PGM_like 18 92 IPR013078 -
Amo17g1162 284 SUPERFAMILY Phosphoglycerate mutase-like 17 246 IPR029033 -
Amo17g1162 284 SMART PGAM_5 18 213 IPR013078 -
Amo17g1162 284 Pfam Histidine phosphatase superfamily (branch 1) 19 92 IPR013078 -
Amo17g1162 284 MobiDBLite consensus disorder prediction 254 284 - -
Amo17g1162 284 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 4 274 - -
Amo17g1162 284 Gene3D - 17 255 IPR029033 -
Amo17g1162 284 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 4 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1162 Amo-Chr17 32135456 32140218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1162 - - gmx:548047 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1162 17 32135456 32140218 Amo17g1162 17 32135456 32140218 ECH