Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1126 ATGGCTGTTTCGACGAGCTTTTCGGGGGCTAAGTTGGAGGCTTTGTTCCTCAAATGTTGTTCCTCTTCCTCTGCCAATGCTGCTTATTCTTTGTGTGTGCCTTCCAAAACCGCCGCCAAGGCCACCAGAACGACGCCGTTTCGGAGAGGCCTGGTTCGTTGTGACGCTTCGGCTTCTCCTGATGTTATTCTTGACAATGCTGCTGCCGTCTCTGCTCTTCAGCAACTTAAGACTTATGCCGCCGATAGGTATACGAAGGAAAAGAGCAGCATCGTGGTGATTGGACTCAGCGTGCATACTACACCTGTGGAAATGCGTGAAAAGCTTGCCATTCCAGAAGCAGAATGGCCCAGAGCCATTGGAGAGCTTTGCGGCCTCAATCATATTGAAGAAGCAGCTGTTCTCAGCACCTGTAACCGAATGGAGATATATGTTGTTGCTCTCTCTCAGCATCGCGGTGTCAAAGAAGTCACCGAGTGGATGTCAAGAACTAGTGGAATCCCTGTTTCAGAACTTTGCCAGCATCGATTTTTGTTGTATAACAAAGATGCCACACAGCATCTTTTCGAAGTCTCAGCTGGTCTTGACTCTCTTGTGCTGGGAGAAGGCCAAATCCTTGCCCAGGTTAAGCAAGTTGTCAAAGTTGGACAAGGAGTCAATGGCTTTGGGAGGAACATCAGCGGCCTATTCAAGCATGCGATTACTGTCGGGAAAAGGGTTAGAGCCGAGACTAATATTGCTGCAGGAGCTGTTTCTGTTAGCTCAGCTGCCGTTGAATTGGCCTTGATGAAGCTACCTGAAACTTCACATGGTAATGCTAAGATGTTGGTTATTGGAGCTGGAAAGATGGGGAAGCTTGTGATCAAACATTTGGTTGCAAAGGGTTGCACAAAGATGGTGGTTGTCAATAGAAGTGAGGAGAGAGTTGCTGAAATCCGTGAAGAGCTAAAGGATGTTGAGATAATCTACAAACCCCTCTCAGAAATGCTTGCTTGTGTAGGTGAAGCAGATGTAGTTTTCACCGGTACAGCCTCAGAAAACCCATTGTTCTTGAAAGATGATGTTAAAGACCTTCCTTCTGTGAGTCAAGACATTGGAGGCCATCGCCTCTTTATTGATATCTCAGTTCCTCGGAACGTGGGTTCATGTGTCTCAGATATCGAGTCTGTGCGAGTTTACAATGTTGATGACCTTAAAGAGGTTGTAGCTGCAAATAAAGAGGATCGGCTGAGAAAAGCAATGGAAGCTCAGGCAATCATTGGTGAAGAATCACAACAATTCGAAGCTTGGAGGGACTCGCTTGAAACCGTTCCTACCATAAAAAAATTGAGGGCTTATGCTGAAAGAATCAGGGCTGCTGAGCTTGAGAAATGCTTAGGTAAGATGGGTGATGATATCTCGAAGAAGACACGGCGTGCCGTGGATGATCTTAGCCGTGGCATAGTCAATAAGTTGCTTCATGGTCCAATGCAGCACCTGAGGTGCGACGGCAGTGATAGCCGGACCCTGACCGAGACCCTCGAGAACATGCATGCTTTGAATAGAATGTTTAGCCTTGAGACTGAAATATCAGTGTTGGAGCAGAAGATTCGAGCCAAGGTTGAACAAAACCATAGTGACAACTAA 1626 0.4674 MAVSTSFSGAKLEALFLKCCSSSSANAAYSLCVPSKTAAKATRTTPFRRGLVRCDASASPDVILDNAAAVSALQQLKTYAADRYTKEKSSIVVIGLSVHTTPVEMREKLAIPEAEWPRAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSRTSGIPVSELCQHRFLLYNKDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRAETNIAAGAVSVSSAAVELALMKLPETSHGNAKMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAEIREELKDVEIIYKPLSEMLACVGEADVVFTGTASENPLFLKDDVKDLPSVSQDIGGHRLFIDISVPRNVGSCVSDIESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEESQQFEAWRDSLETVPTIKKLRAYAERIRAAELEKCLGKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLTETLENMHALNRMFSLETEISVLEQKIRAKVEQNHSDN* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1126 541 Hamap Glutamyl-tRNA reductase [hemA]. 90 517 IPR000343 GO:0008883|GO:0033014|GO:0050661
Amo17g1126 541 ProSitePatterns Glutamyl-tRNA reductase signature. 187 210 IPR018214 GO:0008883
Amo17g1126 541 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 94 244 IPR015895 GO:0008883|GO:0033014|GO:0050661
Amo17g1126 541 Gene3D - 250 402 - -
Amo17g1126 541 Pfam Shikimate / quinate 5-dehydrogenase 260 401 IPR006151 -
Amo17g1126 541 Coils Coil 302 322 - -
Amo17g1126 541 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 90 246 IPR036343 GO:0008883|GO:0033014|GO:0050661
Amo17g1126 541 CDD NAD_bind_Glutamyl_tRNA_reduct 91 413 - -
Amo17g1126 541 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 249 409 IPR036291 -
Amo17g1126 541 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 415 519 IPR015896 GO:0008883|GO:0033014|GO:0050661
Amo17g1126 541 PANTHER GLUTAMYL-TRNA REDUCTASE 1 538 - -
Amo17g1126 541 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 413 500 IPR036453 GO:0008883|GO:0033014|GO:0050661
Amo17g1126 541 TIGRFAM hemA: glutamyl-tRNA reductase 91 499 IPR000343 GO:0008883|GO:0033014|GO:0050661
Amo17g1126 541 Gene3D - 89 249 IPR036343 GO:0008883|GO:0033014|GO:0050661
Amo17g1126 541 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1126 Amo-Chr17 30589235 30592749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1126 K02492 - gmx:100819951 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1126 17 30589235 30592749 Amo17g1126 17 30589235 30592749 ECH