Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1120 ATGTGTAATCCCAAGCCATCTTCAGCATCCACATTTCTCTGTCCCACAAAAACAACCATCCTCATCACTCCCCATTCCAAAGTTGTCGATCATCTTCCAAGCAATGATCTTCATAGATGGCCAACTCCTAACGAGGCTTTAGAAGAAATCAAAGAGATAGGAAAAATATCTGGACCAACAACAATGACAGGATTACTCTTATATTCAAGAGCTATGATCTCCATGGTTTTCCTTGGATACCTTGGAGAAATGGAGCTTGCAGGAGGCTCTCTGTCCATAGGCTTCGCCAACATCACCGGCTACTCTGTCATCTCCGGCTTAGCCATGGGCATGGAACCCATTTGCGGCCAAGCCTACGGCGCCAAGCAATGGAAGATTCTCGGCTTAACGCTTCAGCGCACGGTGCTCCTCCTCCTCTCAACTTCGCTTCCAATTTCATTCATGTGGATAAACATGAACAGGATCCTCTTGTGGTTTGGTCAAGATCATGAGATTTCTTCAATGGCGCAAAGATTCATTCTTTTTTGCATACCGGATCTCTTCTTGCTCTCACTTCTTCATCCATTGAGAATCTACCTCAGGACTCAGAGCATTACAATGCCCGTTACTTATTGCTCCGCCATCAGTGTTCTTCTCCATCTTCCTCTCAACTTCCTCCTTGTCGTTCACCTCAACATGGGTATTGCAGGGGTGGCGACGGCGATGGTCTTAACGAATCTGAACCTCATTCTGTTCCTATCATCCTTCATCTACTTCTCCGGCGTGCATAGAGAGTCATGGGTGCGGCCAAGCATGGAGAGCCTAAAAGGCTGGTCTTCGCTGCTGGCGATGGCGATCCCGAGCTGCGCCTCTGTTTGCCTGGAATGGTGGTGGTACGAATTCATGATTATGCTGTGCGGCCACTTGGCTAACCCAAAAGCCACCATCGCCTCCATGGGAATCCTCATCCAAACAACATCACTCGTATATGTGTTCCCATCTTCTCTCAGCCTCGCCGTCTCCACCAGAGTTGGCAACGAGTTAGGCGCCAACCGGCCCCACAAGGCTCGCATTTGCATGTTGGTGTCCCTCTTCTGCGCCGCCGCCCTCGGCCTGGCCGCCATGGTTTTCAACTCCCTCATGAGACACCAGTGGGGAAGATTCTTCACTAATGACCCTCAGATTTTAGAGCTCACTTCCATAGTGCTGCCAATCGCGGGGCTTTGCGAACTTGGGAACTGTCCGCAGACCACTGGCTGCGGAGTTCTCAGGGGAAGCGCAAGGCCCTCAATTGGCGCAAACATTAACTTAGGATCATTTTATTTGGTCGGTATGCCTGTGGCTATTTTTTTCGGATTTGTTGCTAAAATGGGATTTGCTGGCTTGTGGCTTGGGTTACTTGCTGCGCAAGGCTCCTGTGTCGTTCTCATGATGCTTGTTCTGTATAGAACAGATTGGAATGTTGAAGTGCAAAGAGCCAAAGAACTCACAACCAAATCAGATTCAGAGTCTATTAATAATAATAACACCATCAACAACAACAACAAGAGTTGTTGTAGTGGTCATGGTGATGCTTGTCTTGAGGAGATTGTTATAACTAAAATTGATGATGATGGTGCTGATGATTTTCCAAAGATTTGTTCACTTGAAACAGATCCACTGCTCAGAACCACTACAAAACATACTGTGAATTAG 1674 0.4761 MCNPKPSSASTFLCPTKTTILITPHSKVVDHLPSNDLHRWPTPNEALEEIKEIGKISGPTTMTGLLLYSRAMISMVFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKILGLTLQRTVLLLLSTSLPISFMWINMNRILLWFGQDHEISSMAQRFILFCIPDLFLLSLLHPLRIYLRTQSITMPVTYCSAISVLLHLPLNFLLVVHLNMGIAGVATAMVLTNLNLILFLSSFIYFSGVHRESWVRPSMESLKGWSSLLAMAIPSCASVCLEWWWYEFMIMLCGHLANPKATIASMGILIQTTSLVYVFPSSLSLAVSTRVGNELGANRPHKARICMLVSLFCAAALGLAAMVFNSLMRHQWGRFFTNDPQILELTSIVLPIAGLCELGNCPQTTGCGVLRGSARPSIGANINLGSFYLVGMPVAIFFGFVAKMGFAGLWLGLLAAQGSCVVLMMLVLYRTDWNVEVQRAKELTTKSDSESINNNNTINNNNKSCCSGHGDACLEEIVITKIDDDGADDFPKICSLETDPLLRTTTKHTVN* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1120 557 PANTHER PROTEIN DETOXIFICATION 28 503 - -
Amo17g1120 557 CDD MATE_eukaryotic 49 485 IPR045069 GO:0042910|GO:1990961
Amo17g1120 557 Pfam MatE 59 219 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo17g1120 557 Pfam MatE 280 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo17g1120 557 PANTHER MULTIDRUG RESISTANCE PROTEIN 28 503 - -
Amo17g1120 557 TIGRFAM matE: MATE efflux family protein 71 456 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1120 Amo-Chr17 30230928 30233248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1120 K03327 - gmx:100783792 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1120 17 30230928 30233248 Amo17g1120 17 30230928 30233248 ECH