Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0620 ATGGGAGTGTTTTCGAATAAGATCGATAGAGAACAACTGAAACCCGGTGATCACATTTACTCATGGAGGCAAGCTTACATCTACGCACATCACGGAATATATGTCGGTGATGCAATGGTGACCCACTTCACCAGGGGAGCAGGACAAGAAATTGGGACAGGAACTGTTCTGGACCGTCTCCTCGTTAGTTCTTCTCCTGCTCGTGATCTTGACAATCCTTGCCCAAAGTGTGGTGACTTATCGAAGAATGAGGGTGTCATTTCGTCGTGTTTGGATTGTTTTCTTTATGGTGGTGAGCTATACCTCTTTGAATATGGTGTCTCAGCTGCTTTTTTTCTTGCCAAACCTCGAGGAGGTACCTGTACCCTTGCTGCTTCTGATCCACCTGAAGATGTCCTTCGCCGTGCTTCATTTCTTCTTGAAAAGGGATTTGGCGGTTATAACATTTTCAAGAATAACTGCGAAGACTTTGCAATTTACTGCAAAACCGGTCTGCTTGTGTTCACAAATCTCAGTGTAGGCCGGAGTGGACAGGCAGCATCTTACTTGGCTGCTGCTAGTGCTGTAGTTTCTACACCACTTCGTTTTATGACCACGAGTATGAGTGGTTTGGCCGCAGTTGGTTATGGCATGTACTGTGTTAGCCGATTGGTTTCTGATATCGGAGTACGTCGTGACGTATCTAAAGTTCCAGTGGAAACACTTGTGGCTTCTCATAGCTTAAGTGAGCCGGAGATGACAGGCAACATAAATGAACCAGAGAAGACAGCTGAGATGCCCAAGGACACAGCCAAGAACGATTAG 804 0.4602 MGVFSNKIDREQLKPGDHIYSWRQAYIYAHHGIYVGDAMVTHFTRGAGQEIGTGTVLDRLLVSSSPARDLDNPCPKCGDLSKNEGVISSCLDCFLYGGELYLFEYGVSAAFFLAKPRGGTCTLAASDPPEDVLRRASFLLEKGFGGYNIFKNNCEDFAIYCKTGLLVFTNLSVGRSGQAASYLAAASAVVSTPLRFMTTSMSGLAAVGYGMYCVSRLVSDIGVRRDVSKVPVETLVASHSLSEPEMTGNINEPEKTAEMPKDTAKND* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0620 267 PANTHER OS05G0310600 PROTEIN 1 242 - -
Amo17g0620 267 MobiDBLite consensus disorder prediction 241 267 - -
Amo17g0620 267 Pfam Lecithin retinol acyltransferase 12 166 IPR007053 -
Amo17g0620 267 Gene3D endopeptidase domain like (from Nostoc punctiforme) 4 169 - -
Amo17g0620 267 ProSiteProfiles LRAT domain profile. 20 170 IPR007053 -
Amo17g0620 267 PANTHER OS05G0310600 PROTEIN 1 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0620 Amo-Chr17 13291788 13294527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0620 - - ccaj:109814159 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0620 17 13291788 13294527 Amo17g0620 17 13291788 13294527 ECH
Amo17g0620 17 13291788 13294527 Amo07g0916 07 16822358 16825048 hybridization