Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0479 ATGGGAAACGCAATAGGAATAAGGAGTAAGAAGGCGAAGGTTATGAAGATAGATGGCGAGACTTTCAAGTTAAAAACACCGGCAGTAGCAAACGACGTCGTAAAGGACTACCCAGGTCACGTTCTTCTTGATTCCCAAGCCGTTAAGCACTTCGGCCTACGGGCCAAGCCTCTTGACCCCGACCAGTCGTTAAAGCCCAACAAGATCTACTTCTTGGTTGAATTACCCAAGGTTAAGCCCGAAGTAGAGTCCGACGGGCTTCCTAGACGGGTACGCTCGAGTGGCGTGCGTGGCATCAACGCAAAAGAAAGGCTTGAGCTTCTTGCGCTCTCCAAACGCTCCGCTTCGGATCTCACGCTCGTGAGACCTGAAGCGGGGATCAATGGTGGGCCCACTAGGGTCCGGATGCGGTTGCCCAAGGCCCAACTTGAGAAGTTGATTGAGGAGAGTAACAACGACGGTGCTGAGGTGGCAGAGAAGATCATGAATATGTATATGGCCGGTGCCGCCGCAGAGGACGGTGGTGTGAAGGTGGCACAACATCAACATAATAATAATAACAAGCCACGCGGGAAACGAGTGAGTTTTAGTCCAATCCAAAATGAAGAAATTATTAATGGAGAGGAAACTACTTTACAATAG 642 0.5 MGNAIGIRSKKAKVMKIDGETFKLKTPAVANDVVKDYPGHVLLDSQAVKHFGLRAKPLDPDQSLKPNKIYFLVELPKVKPEVESDGLPRRVRSSGVRGINAKERLELLALSKRSASDLTLVRPEAGINGGPTRVRMRLPKAQLEKLIEESNNDGAEVAEKIMNMYMAGAAAEDGGVKVAQHQHNNNNKPRGKRVSFSPIQNEEIINGEETTLQ* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0479 213 Pfam PADRE domain 1 150 IPR025322 -
Amo17g0479 213 MobiDBLite consensus disorder prediction 181 213 - -
Amo17g0479 213 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 207 - -
Amo17g0479 213 Coils Coil 140 160 - -
Amo17g0479 213 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN 1 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0479 Amo-Chr17 9336920 9340274 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0479 - - pvu:PHAVU_008G233900g 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0479 17 9336920 9340274 Amo17g0479 17 9336920 9340274 ECH
Amo17g0479 17 9336920 9340274 Amo13g4168 13 135256320 135258952 ECH
Amo13g4168 13 135256320 135258952 Amo17g0479 17 9336920 9340274 ECH
Amo17g0479 17 9336920 9340274 Amo07g0621 07 7725591 7729678 hybridization