Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0298 ATGAATCGGAGTGGTTTCAGGGGTCATGAAATGCAGATGCAAGCTGCGTTTAACCAGAGGCACCACCAATTGGGGGTGTTGAGGTCTTCTTCGGTGATGATGAAGGACAGGGACGAAGAACTCGCCTTGTTCCTTGAGATGAGGAAACGCGAGAAGGAGCGAACCGATTCGCTGCTTCGCGCCTCTGATGAACTCCATGCTGACGCACCCTTAGGGTCGAACCCGGGAACATCTCCATTGTTTAACATCCCGTTAGCCACGCCAGCTCCTGTGAGGAAGACTGGTGCTGATGATTTTCTCAATTCGGAGAACGATAAGAATGACTATGATTGGCTTCTAACTCCTCCGGGAACTCCACTTTTTCCATCTTTGGAGATGGAAACTCAAAAAACTGTTATGAGTCAGCTTAGTGATCCAACTTCACGTCCCAATGTATTAAAATCTAGATTGGCAAATTCTCTGTCAGAACCTAGTGGGAGGAGCAGCCTAGTATGTAAACAATCAGCTTTCTCGCCCGGGTTAAGTTCATCTAGTGGCGTAACTAGGAGGCCCTCATCATCATCAGGAAATCCAGGATCAAGACCTGCAACTCCTACTGGACGCCCTACATTGACCAGAGTTTCAAAACCCAGATCTTCAACACCTACTTCTCGGGCTACCTTATCTTCAGCTAGGACGGCGGTTGCTACAAACAAGACCACATCTTCTACAACCAAGCCTGTGGTTTCTCTTACAAAGAGTATGATTTCTGCCTCCAAGACTACGGTCGCTGCAACTAAACCCACAGTTCCAGCTAGATCCTCTACACCTTTGTCAAGATCTACTGTAAGATCTTCAACACCAACTAGCAGGCCTACCATACCTTCATCCAGGTCCATATCAAGGGCATCTACTCCAACTAGGCGACCAACCACACCATCAAGTGCACCCAGCATATCTGCTCCTTCAGCTAAGGCTTCTTCAATCTCCAAGCCAGCTCCGGTGGTGTCACAGCAACCAGCATCTTCACGTGGCACTTCACCAACTGTAAGATCAAGACCATGGAATCCATCTGAGATGCCTGGCTTTTCACTTGATGCTCCACCCAATTTGAGGACATCACTACCAGAAAGGCCACTGTCAGCAACTAGGGGGAGGCCTGGAGCACCCAGTTCTCGGTCTTCATCTGTTGAGCCAGCTCCTAGCGGCAGACCAAGGCGGCAATCATGTTCTCCTTCTAGAGGACGGTCCTCTGGCGGTTCTCATCCTACAGGAAGCTCTATGCCTGCTGTCAGTCGTGGGTACTCAAAAGCAAATGACAATGTCAATCCTATTGTAATTGGCACCAAGATGGTTGAGAGGGTAATAAATATGCGGAAATTAGCACCACCAAGGCTGGATGACAAAAACTCTCCCCATGGTAATCTTTCTGGGAAGTCATCTTCGTCACCAGATAGCTCAGGTTTTGGAAGAACACTCTCAAAGAAATCCTTGGATATGGCTATTAGGCATATGGATATACGGCAAAGGGTTCCAGGCAATTTACGACCATTGATGACAAACATTCCAGCATCTTCAATGTATAGTGTGCGCACGGGGGCTCAGCGTAGCCGTACTGTCAGTGTCTCGGGCTCACCTCATGCCACAAGCAGTAACGCTGGTTCTGAAATTAGTGTAAATCAAAATGGACACTGTCTAGATAGTAGTGAAATAGATGAGGATTTCGTCAGTGAGAGAGGTGGTCAATCTCCGACGAGTGTCCGGGGCAGGTGA 1752 0.4834 MNRSGFRGHEMQMQAAFNQRHHQLGVLRSSSVMMKDRDEELALFLEMRKREKERTDSLLRASDELHADAPLGSNPGTSPLFNIPLATPAPVRKTGADDFLNSENDKNDYDWLLTPPGTPLFPSLEMETQKTVMSQLSDPTSRPNVLKSRLANSLSEPSGRSSLVCKQSAFSPGLSSSSGVTRRPSSSSGNPGSRPATPTGRPTLTRVSKPRSSTPTSRATLSSARTAVATNKTTSSTTKPVVSLTKSMISASKTTVAATKPTVPARSSTPLSRSTVRSSTPTSRPTIPSSRSISRASTPTRRPTTPSSAPSISAPSAKASSISKPAPVVSQQPASSRGTSPTVRSRPWNPSEMPGFSLDAPPNLRTSLPERPLSATRGRPGAPSSRSSSVEPAPSGRPRRQSCSPSRGRSSGGSHPTGSSMPAVSRGYSKANDNVNPIVIGTKMVERVINMRKLAPPRLDDKNSPHGNLSGKSSSSPDSSGFGRTLSKKSLDMAIRHMDIRQRVPGNLRPLMTNIPASSMYSVRTGAQRSRTVSVSGSPHATSSNAGSEISVNQNGHCLDSSEIDEDFVSERGGQSPTSVRGR* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0298 583 MobiDBLite consensus disorder prediction 254 347 - -
Amo17g0298 583 MobiDBLite consensus disorder prediction 529 559 - -
Amo17g0298 583 PANTHER GASTRIC MUCIN-LIKE PROTEIN 4 188 - -
Amo17g0298 583 PANTHER GASTRIC MUCIN-LIKE PROTEIN 188 583 - -
Amo17g0298 583 MobiDBLite consensus disorder prediction 128 241 - -
Amo17g0298 583 MobiDBLite consensus disorder prediction 254 434 - -
Amo17g0298 583 MobiDBLite consensus disorder prediction 380 434 - -
Amo17g0298 583 MobiDBLite consensus disorder prediction 455 485 - -
Amo17g0298 583 MobiDBLite consensus disorder prediction 466 485 - -
Amo17g0298 583 MobiDBLite consensus disorder prediction 529 583 - -
Amo17g0298 583 MobiDBLite consensus disorder prediction 94 114 - -
Amo17g0298 583 PANTHER PROTEIN, PUTATIVE-RELATED 188 583 - -
Amo17g0298 583 PANTHER PROTEIN, PUTATIVE-RELATED 4 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0298 Amo-Chr17 4840341 4844012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0298 - - qsu:111990623 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0298 17 4840341 4844012 Amo17g0298 17 4840341 4844012 ECH
Amo17g0298 17 4840341 4844012 Amo07g0498 07 5607522 5611451 hybridization
Amo10g1079 10 21568128 21573234 Amo17g0298 17 4840341 4844012 PCT
Amo17g0298 17 4840341 4844012 Amo10g1079 10 21568128 21573234 PCT