Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4153 ATGGGCGAAATCTACAAAATCAACTCAATAGATTGGAGACCCTCTCCGGTAGTCGCTCTTGCCACCAGCGTCGACGGCCTCCGTGTAGCCGCAGCTCGCCAAGACGGTTCCCTTGAACTCTGGCTCGTATCTCCCGGCTCCATTGGCTGGCACTGTCAACTTACGATTCATGGTGACCCTACTACAAGAGTATCTTCGCTTCTTTGGTGCCCTGGCGGCTCCAATGGCATGCCGTGCGGTCGTTTGTTTTCGTCTAACATTGATGGTTCAGTTTCCAAGTGGGATCTTTTCCACCTGAAGCAAACGACTGTGCTTGATTCAGATGGTGTTTCCATTTGGCAAATGGCTGTTACGTTCCCTAAGGTTGATTTAGTTAATAATGTGCCTAATGGTGATGTTATGGGGAATGGTTATGCCAGTAAAATTCAAGAATCTGATGAACAAGAGAGCAGCGATAGTGACGAAGATAATGACTCACCTGATGCTGGCAAGCAATCTGTTCTTGAGTCTCCACGTGTAGCAATTGGTTATGATGATGGAAGTGTGAGGATTTATGCCATATCTGACGAAGATGAATTCCTATATGTAAAATCATTGCCTCGGGTCAAAGGACGAGTTTTAAGTGTGACTTGGAGCACTGATGCTAACTACATATACTCCGGAAGTAGTGATGGGTTAATACGGTGCTGGGATGCTACGTCTAGTCGTGAAATTTATAGGATTACGGCTGGGCTTGGAGGTTTGGGTGGCGGACATGAACTTTGCATATGGTCGTTACTGTCTTTAAGGTCTGGGACGCTTGTTAGTGCAGACAGCAGTGGCAGTGTCCAATTTTGGGATAGTAAACATGGAACTCTCTTGCAAGCACATTCATTGCACAAGGGCGATGTAAATGCTTTGGCTGCATCCCCAAGTCATGATAGGGTGTTCTCGGCTGGTTCTGATGGCCAGGTTATTCTCTATAAGCTGTCTAGCCAGTCAGCATCTTCCGACAGTGTCAACCCCACTGTGATGACAAAGAAATGGATCTATGTTCACTATGTWAGGTCTCATACACATGATGTCAAGGCCTTGACTGTTGCTGTGCCGATATCTCAAGAAGATTCTCTGCCAGAAGAGAGGAATAAAAGACGTCGGCTTGAAGGAAAGCCTGTTGATTTAAATTATCATAAATGGTCCCAATTTGGGGTTCCCATGCTTATKTCAGCAGGAGATGACACAAAACTATTTGCATACCCGGTAAAGGAATTCACTAAGTTTTCTCCTCATGATATTTGTCCTGCGCCTCAGAGAACCCCYGTTCAYCTAGTGCTTAATACTGCCTTCAATCAATCATCAATGCTTTTAGTCCAGTCTAGGCAATGGTTAGATGTACATTTACTACATCTTGGAAATGTTCGTACAGCTGGATGCTTTACTAAGACTGAAATCCTTGCACGAGTGAAGACTAAGGAATCTCGGAAGATTGCTTGCAGCACAATTGCTAATTCTGGGGAGCATTTTGCYTACTCWGATAATGCAAGGCCTAGTCTGTTTGAGTTAAAGAGGAGTGYAGTTGGAAAGATTACATGGAGCGTGAGTAGAAAGAAGCTTCCCRCGAGGTTACCCTTTGCCCATTCAATGATTTTCACCCATGAGTCATCCTGGTTGATACTAGCTGGCCATGATAGGAGGATATATGTTGTGGATGTCAGCACATCGGAACTAGTGCATGCTTTTACACCCTGTCGGGAGCTGGATGACGAGAAATTGCCTCCGAAGGAACCTCCCATTACTAGATTATTTACCAGTTCCGACAGGCAGTGGCTGGCAGCTGTTAACTGCTTTGGCGATATATATGTGTTTAACTTGGAGACACTAAGGCAGCACTGGTTCATCTCAAGATTAGATGGTGCCTCTGTRACGGCTGGTGGGTTTCCTCCCCAGAACAACAATGTAATGATAGTTACAACTTCTTCGAATCAAGTGTATGCATTTGACGTTGAGGCCAAGCAGTTGGGAGAATGGTCGATGAGGAATACATATGTTCTTCCCCGGAGATTCCAGGAGTTTCCCGGRGAAGTCATTGGGCTTTCATTTCCTCCCTCATCAACTTCATCATCAGTTGTTATTTATAGCTCCAGGGCAATGTGCTTGATTGATTTTGGATTACCGGTGGAGCAAGACGAAAGCGATATGCTAAATGCTCAAGAATCATTGYCCAYGAACTTGCAACAAAACTTTACTAATGTTAAGAAGAGGACAAAATWTAGGAGAAACTTTGACGTATTTTCATTAGATAACCCAGTTTTATTTTTAGCTCATGTCTCAAAAAATTCCTTCTTTATGGTAGAAAAGCCATGGCTGGAAGTGGTTAAAAGACTAGAAGCCCCACCAGTTCATAAACATATTTTTGGCACCTAA 2403 0.4403 MGEIYKINSIDWRPSPVVALATSVDGLRVAAARQDGSLELWLVSPGSIGWHCQLTIHGDPTTRVSSLLWCPGGSNGMPCGRLFSSNIDGSVSKWDLFHLKQTTVLDSDGVSIWQMAVTFPKVDLVNNVPNGDVMGNGYASKIQESDEQESSDSDEDNDSPDAGKQSVLESPRVAIGYDDGSVRIYAISDEDEFLYVKSLPRVKGRVLSVTWSTDANYIYSGSSDGLIRCWDATSSREIYRITAGLGGLGGGHELCIWSLLSLRSGTLVSADSSGSVQFWDSKHGTLLQAHSLHKGDVNALAASPSHDRVFSAGSDGQVILYKLSSQSASSDSVNPTVMTKKWIYVHYVRSHTHDVKALTVAVPISQEDSLPEERNKRRRLEGKPVDLNYHKWSQFGVPMLXSAGDDTKLFAYPVKEFTKFSPHDICPAPQRTPVHLVLNTAFNQSSMLLVQSRQWLDVHLLHLGNVRTAGCFTKTEILARVKTKESRKIACSTIANSGEHFAYSDNARPSLFELKRSXVGKITWSVSRKKLPXRLPFAHSMIFTHESSWLILAGHDRRIYVVDVSTSELVHAFTPCRELDDEKLPPKEPPITRLFTSSDRQWLAAVNCFGDIYVFNLETLRQHWFISRLDGASVTAGGFPPQNNNVMIVTTSSNQVYAFDVEAKQLGEWSMRNTYVLPRRFQEFPGEVIGLSFPPSSTSSSVVIYSSRAMCLIDFGLPVEQDESDMLNAQESLXXNLQQNFTNVKKRTKXRRNFDVFSLDNPVLFLAHVSKNSFFMVEKPWLEVVKRLEAPPVHKHIFGT* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4153 800 Gene3D - 142 431 IPR015943 GO:0005515
Amo16g4153 800 MobiDBLite consensus disorder prediction 135 165 - -
Amo16g4153 800 ProSiteProfiles Trp-Asp (WD) repeats profile. 290 331 IPR001680 GO:0005515
Amo16g4153 800 SUPERFAMILY WD40 repeat-like 7 326 IPR036322 GO:0005515
Amo16g4153 800 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 800 IPR044622 GO:0010073|GO:0035266
Amo16g4153 800 Gene3D - 5 141 IPR015943 GO:0005515
Amo16g4153 800 SUPERFAMILY WD40 repeat-like 251 709 IPR036322 GO:0005515
Amo16g4153 800 Coils Coil 736 747 - -
Amo16g4153 800 Pfam WD domain, G-beta repeat 206 231 IPR001680 GO:0005515
Amo16g4153 800 Pfam WD domain, G-beta repeat 293 321 IPR001680 GO:0005515
Amo16g4153 800 Gene3D - 522 715 IPR015943 GO:0005515
Amo16g4153 800 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 199 236 - -
Amo16g4153 800 ProSiteProfiles Trp-Asp (WD) repeats profile. 199 240 IPR001680 GO:0005515
Amo16g4153 800 SMART WD40_4 283 322 IPR001680 GO:0005515
Amo16g4153 800 SMART WD40_4 192 231 IPR001680 GO:0005515
Amo16g4153 800 SMART WD40_4 49 95 IPR001680 GO:0005515
Amo16g4153 800 SMART WD40_4 3 42 IPR001680 GO:0005515
Amo16g4153 800 SMART WD40_4 528 563 IPR001680 GO:0005515
Amo16g4153 800 SMART WD40_4 234 280 IPR001680 GO:0005515
Amo16g4153 800 Coils Coil 727 733 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4153 K14548 - gmx:100797494 1139.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4153 16 154198270 154203699 Amo16g4153 16 154198270 154203699 ECH