Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4108 ATGGAAGCCATGAAGCAGGAAAAGCTCTGCCGCCGGCAGGACACTGCCCTTGCCTCCGCCGCATCGAAGCTCGCCGTCGACGAGGACGACCCCCTCGCTGGAAACTACGGCGACATCACAATGGAGTTCCTGCAGTCGAAGACCATGGACCCCAGCGCATGGACACGGGTTGTGAATCTGGAGAAGTCTCTAGAAGGGAAGCACGTTCTGATCCGAGCTAGGGTTCAGGCGATCCGTCGCGTTGGGAAGAAGATGGCCTTGTTGGTTGTGAGAGAGAAGGGCTTCACCGTGCAGTGTTTGGTGCAAGAGCAGCGAGATTTGGTTAGCGTGCAGATGGTGAAGTACGCTGCCGCGCTGAGCCGCGAATCTGTTATCGATGTTGAAGGTCTTGTTTCGGTCCCTTCGGAATCAATCAAAGGTGCCACACAGCAGGTGGAAGTTCAAGTGAGGAAGTTGTATTGTGTTAGCAGGGCCCCTCCAACTCTACCCTTTAATCTCGAGGATGCTGTTCGAAGTGAAGCTGAAATTGAGAAGGCTCTTCAGGCTGGTGAACAACCTGTTCGTGTTAATCAGGATACACGTTTGAAGTCTAGAGTATTTGAGCTCAGAACCCCGGCTAATCAAGGAATTTTCCGTATTCAGTCACAAGTTGGAAACGCATTCAGAAAATTCTTGTCATCTGAAGGCTTTGTTGAAATCTACACTTCAAAGTTGATTGCTCTTTTGAACTATAAAGGGCACCCTGTATGCCGTGCTGAATCACCACACCTCCACAAGCAAATGCCAATATATGCTGATGTTGGCCGTGTTTTTGAAATTGGTCCTGTGTTTAGGGTTGAAGATTCCCTCACACCCAGACATCTGTGTGAGGTTACCGGTCTTGATGTTGAAATGGAGATTATGGAGCATTATGATGAGGTTGTTTGTCTCAATATTCGATATAGCTTGAACCAGAATTGTAAGAAGGAGCTTGAAGCTGTGGCACTCCAGTACCCATTTGAACCTTTAAAGTATCTTCGTCTAACATATGAAGAAGGGGTTCAGATGCTCAAGGTATGGCATGGAGTTCTATATCCTTTACCGATACCCCTTGGCTGGAAGCCCATTTTACACAATGCGCCTTGCTATGATAATTCACAGTACTCCAACTCATTTAATGTTTTTATTAGAGGTGAGCAGATTCAGGAGCTCAGCATGTCCACGATGCAGAGATGTTGGAAAAACGGGCTAAGACTTGCAGCATTGATGTCAAGAAGATATCTACATATATTGATTCTTTCAGATATGGTGTACCACCACACGGTGGCTTTGGAGTTGGTTTGGAGCGCTTAG 1332 0.473 MEAMKQEKLCRRQDTALASAASKLAVDEDDPLAGNYGDITMEFLQSKTMDPSAWTRVVNLEKSLEGKHVLIRARVQAIRRVGKKMALLVVREKGFTVQCLVQEQRDLVSVQMVKYAAALSRESVIDVEGLVSVPSESIKGATQQVEVQVRKLYCVSRAPPTLPFNLEDAVRSEAEIEKALQAGEQPVRVNQDTRLKSRVFELRTPANQGIFRIQSQVGNAFRKFLSSEGFVEIYTSKLIALLNYKGHPVCRAESPHLHKQMPIYADVGRVFEIGPVFRVEDSLTPRHLCEVTGLDVEMEIMEHYDEVVCLNIRYSLNQNCKKELEAVALQYPFEPLKYLRLTYEEGVQMLKVWHGVLYPLPIPLGWKPILHNAPCYDNSQYSNSFNVFIRGEQIQELSMSTMQRCWKNGLRLAALMSRRYLHILILSDMVYHHTVALELVWSA* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4108 443 Gene3D Bira Bifunctional Protein; Domain 2 163 366 IPR045864 -
Amo16g4108 443 SUPERFAMILY Nucleic acid-binding proteins 34 161 IPR012340 -
Amo16g4108 443 Pfam tRNA synthetases class II (D, K and N) 191 349 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Amo16g4108 443 SUPERFAMILY Class II aaRS and biotin synthetases 190 399 IPR045864 -
Amo16g4108 443 Gene3D - 33 160 IPR012340 -
Amo16g4108 443 CDD AspRS_cyto_N 68 168 - -
Amo16g4108 443 PANTHER ASPARTYL-TRNA SYNTHETASE 17 351 IPR004523 GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422
Amo16g4108 443 PANTHER ASPARTATE--TRNA LIGASE, CYTOPLASMIC 17 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4108 Amo-Chr16 153588638 153593290 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4108 K22503 - gmx:100811577 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4108 16 153588638 153593290 Amo16g4108 16 153588638 153593290 ECH