Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4078 ATGGAGGCTGCAGATGCAGCAGTGTGGCAAGGTGCGGTTTTGGGTGGAATAGTGATATGGGTTGTCACAGCTTCATTCCTGGATGTTACTTTCAAGCTTAGATCTTTCCTTCAACCTTGGGTTTCTCACCATGTCGATATTGGAGTCCCTTTCATCCTTCAGATCCAGAATTACCGGTTTGGCTTCTTGGATGCATTGTTCTCGGGTTTGTCTTGCGTTGTTTCTGTGCCCTTCTACACTGGTTTCCTCCCTCTGCTTTTTTGGAGTGGCCATGGTAAATTGGCGAGACAGATGACGTTGTTGATTGCGTTTTGTGATTACACTGGAAACTGCATAAAGGATGTGGTTTCTGCTCCAAGACCCCCTTCTCCCCCTGTCCATAGAATTACTGCTACAAAAGATGAAGAAGATAATGCTTTAGAATATGGACTCCCTTCTTCTCATACTCTTAACACAGTTTGCTTATCCGGCTACCTTTTGCACTATGTGCTGTATCATACTCAAATAGATGGTTTCCATGCTACCTATATTGGAGTTCCTCTTGTTGTATTGTTGGTGACTCTCATTGGCTTCGCAAGAGTCTATCTTGGCATGCACAGTGTGATTGATATCATTGCTGGCCTTCTTTTTGGACTTGGGATCCTTGCATTTTGGCTTTCAGTTGATGAATACATAGACAATTTTGTGGTCTCTGGACAAAACGTTATATCATTTTGGGCTGGCTTGAGCTTCCTCTTGCTTTTTGCTTATCCAACTCCAGAGATTCCAACTCCGAGTTTTGAATATCACACTTGTTTCAATGGTGTTGCATTGGGAATTGTAACGGGGGTACAGCTAACATATCATCAATTTCACAGTGAATTTGTGCCTCGTTTGTTCACTTCAGAAATGAAGATACTTGTATTTGCGGGAAGAGTGTTGGTGGGGATTCCAACAATTTTGATTGTGAAATTCTGCAGCAAGGCTCTAGCAAAATGGACGATTCCAGTGGTAGCAAACACATTGGGCATTCCAGTAAAATCAAGCAGCTATATCCCCAAATTGAATCCATTAGTCACAGGAAATAAGCCTAAAGAAGGTTACTTCCAAAAGCTGCTTTCAACGCAGGACTCATTTGATGTTGATACCGGAATTAGATTTGTTCAGTATATTGGCCTTGCATGGTCTGTAGTAGATCTTGTGCCATCTCTTTTTACATACTTGAGCTTGTGA 1212 0.4216 MEAADAAVWQGAVLGGIVIWVVTASFLDVTFKLRSFLQPWVSHHVDIGVPFILQIQNYRFGFLDALFSGLSCVVSVPFYTGFLPLLFWSGHGKLARQMTLLIAFCDYTGNCIKDVVSAPRPPSPPVHRITATKDEEDNALEYGLPSSHTLNTVCLSGYLLHYVLYHTQIDGFHATYIGVPLVVLLVTLIGFARVYLGMHSVIDIIAGLLFGLGILAFWLSVDEYIDNFVVSGQNVISFWAGLSFLLLFAYPTPEIPTPSFEYHTCFNGVALGIVTGVQLTYHQFHSEFVPRLFTSEMKILVFAGRVLVGIPTILIVKFCSKALAKWTIPVVANTLGIPVKSSSYIPKLNPLVTGNKPKEGYFQKLLSTQDSFDVDTGIRFVQYIGLAWSVVDLVPSLFTYLSL* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4078 403 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 10 234 - -
Amo16g4078 403 PANTHER PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED 7 402 - -
Amo16g4078 403 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 7 402 - -
Amo16g4078 403 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 25 223 IPR036938 -
Amo16g4078 403 CDD PAP2_SPPase1 62 219 - -
Amo16g4078 403 SMART acid_phosph_2 95 219 IPR000326 -
Amo16g4078 403 Pfam PAP2 superfamily 99 219 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4078 Amo-Chr16 153255869 153259197 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4078 - - gmx:100807865 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4078 16 153255869 153259197 Amo06g0397 06 5430482 5433822 hybridization