Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4031 ATGGTAAAAATTTATATACATTTCAAGCACAACAAACCCCAAGATCTATGGATCTCCATTCACGGCAAAGTCTACAACGTCACCAACTGGCTCCAATACCATCCAGGTGGCGCCTCCCCATTGCTCAACCTCGCCGGTCAAGACGTAACCGATGCATTCCTCGCTTTCCACCCCAACCACGCCTTCAACCGCCTCCAACCTTTCTTCACCGGCTCCTACCTCGCCAACCACAACGTCTCCGAAGCTTCCAGAGACTACCGAAACCTCCTCTCCACCTTCACAAGAATGGGCCTCTTCGACCATAACCGCGGCGTTCTCACTTCTCTCGTCTTCATTTTCATTATGTTCTGTTTATGCGTTTACGCGGTTCTCTTCGCCCAGACCGGCCTGGTTCGCGTTGGCTCCGGCGCTTTGATGGGATTTTTATGGATTCAGAGCGGTTGGATTGGTCATGACTCCGGTCATTACAAGATTGTTAGTTCCAAGAAACTCAACCGGGTTCTTCAAATTCTTTCCGGTAATGTTCTGGCCGGAATTAGCATTGGTTGGTGGAAATGGAACCACAATGCGCATCACATTGCTGTTAACAGCCTCGATTTCGATCCCGATCTTCAACACCTTCCGTTCTTCGTCGTCTCTTCGAGGTTCTTCAATTCACTCTTTTCTTGCTTCTACGAGAGGATCATGAAATTCGATTCGTTTTCTAGGTTATTGGTTAGTTATCAGCATTGGACATTTTACCCTGTTATGTGCTTCGCTAGGCTCAATTTGTTTGCGCAATCTTTCATGTTGTTGTCTTCGAATCGGAAGGTTCCTGATAGAGGAACTGAGATTTTAGGGCTAATTGCTTTCTGGATTTGGTACCCTTGCTTGGTTTCTTGTTTGCCTAATTGGGGGGAAAGGATTTTGTTTGTGTTAGCAAGCTTTTCTGTTACTGGAATTCAGCATGTTCAATTCTGTTTGAACCATTTCTCTGCCAAAGTTTATGTTGGTCCTCCAACCGCAACGGATTGGTGTGAGAAGCAGTGTAATGGTACTCTTGATGTGAGTTGTTCTTCTTGGATGGATTGGTTCCATGGAGGTTTGCAGTTTCAGGTTGAGCATCACTTGTTTCCGAGGCTGCCTCGGTGCCATCTTCGGAAGATTTCTCCCTTTGTTAAGGATCTTTGCAAGAAGCATAATCTTCCTTACAATTGCGTGTCCTTCTGGAAGGCAAATGCTCTCACGATTCGGACGCTGAGGGACGCTGCGCTGCAGGCTCGCGACGTTTCTAATCCTGTTCCAAAGAATCTTGTTTGGGAAGCTGTTAACACTCATGGATGA 1323 0.4656 MVKIYIHFKHNKPQDLWISIHGKVYNVTNWLQYHPGGASPLLNLAGQDVTDAFLAFHPNHAFNRLQPFFTGSYLANHNVSEASRDYRNLLSTFTRMGLFDHNRGVLTSLVFIFIMFCLCVYAVLFAQTGLVRVGSGALMGFLWIQSGWIGHDSGHYKIVSSKKLNRVLQILSGNVLAGISIGWWKWNHNAHHIAVNSLDFDPDLQHLPFFVVSSRFFNSLFSCFYERIMKFDSFSRLLVSYQHWTFYPVMCFARLNLFAQSFMLLSSNRKVPDRGTEILGLIAFWIWYPCLVSCLPNWGERILFVLASFSVTGIQHVQFCLNHFSAKVYVGPPTATDWCEKQCNGTLDVSCSSWMDWFHGGLQFQVEHHLFPRLPRCHLRKISPFVKDLCKKHNLPYNCVSFWKANALTIRTLRDAALQARDVSNPVPKNLVWEAVNTHG* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4031 440 CDD Delta6-FADS-like 133 395 - -
Amo16g4031 440 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 71 IPR001199 -
Amo16g4031 440 SMART Cyt_b5_2 6 74 IPR001199 -
Amo16g4031 440 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 9 75 IPR036400 -
Amo16g4031 440 Pfam Fatty acid desaturase 136 399 IPR005804 GO:0006629
Amo16g4031 440 Gene3D - 8 85 IPR036400 -
Amo16g4031 440 PANTHER FATTY ACID DESATURASE 2 9 439 IPR012171 GO:0016491
Amo16g4031 440 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 9 74 IPR001199 -
Amo16g4031 440 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 9 439 - -
Amo16g4031 440 PIRSF FA_sphingolip_des 7 427 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4031 Amo-Chr16 152496059 152498014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4031 9 440 Lipid Metabolism Gene Families AT2G46210 61.663 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4031 K21737 - mnt:21402436 691.034