Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4026 ATGATGAAGAACTTTGCAACACTAATATTACTTGCATTGTTTCTTTTTATCCTGCAAAATGGAAACAGAATTGAAGCATTCCCAGATAGGATTATTAGTTCTTCTTCTATTAATCAACCATATCGAACTTCTTATCACTTTCAGCCACCAAAAAATTGGATGAACGATCCAAATGCACCAATGTACTATAAAGGTGTTTACCACCTTTTCTACCAGCATAATCCTTATGCAGCAACCTTTGGAGACAGAATTGTATGGGCTCATTCTGTGTCCTATGATCTCATCAATTGGATTCATCTAAACAATGCTATCGAACCGAGCGAGCCTTTCGACATCAATAGCTGCTGGTCAGGTTCAGCCACCATACTCGAAGGAGGCGAAAAGCCTTTTATTTTGTACACAGGTATTGATGAAAACAAACACCAAGTTCAAAACTTGGCTATTCCAAAGAATGCATCAGATCCTTTCCTAAGAGAATGGATCAAACTCCCTCAAAACCCTGTGATGAAACCACCAATTGGTGTTGAGTTGAACAATTTTAGAGACCCTTCAACTGCTTGGCTTGGAAATGATGGAAAATGGAGGGTAGTTGTTGGTGCTCAAAATGGTGATCAAGGGAAGGTTATTTTGTACCATAGTAAGGATTTTGTTGATTGGAAAGTGGATTCTAGGCCGTTTTTCGCGACGGATAACACCGGAGTTTGCGAGTGTCCGGACTTCTTTCCGGTGTTGATCAAAGGTGAAAATGGAGTAGATACATCTTTTGATCATCAAGATCCTAATTTTGTTAGGCATGTAATGAAGATAAGTTATCTTAGTAGGTTACATGACTATTATTTTCTTGGAAACTATAATGTCTTTGGTGACAATGAAAATTTTGTTCCTGATATTAAATTCACAGGAACTAGTTCAGATTTAAGGTATGATTATGGTAAATTTTATGCTTCCAAATCATTTTTTGATTATGCTAAGAACAGGAGAATATTGTGGGGATGGGTGAATGAATCTGATTCTACACAAGATGATATTCAAAAAGGATGGGCTGGTATACAGTCAATTCCAAGGCAAATTTGGCTTGATAAAAGTGGGAAGAGATTGGTGCAATGGCCAATTGAAGAGATTGAAAAATTACATGACAAACAAGTTAGCATTAGTAAAGAAAACCTCCTTAGTGGATCAACTCTTCAAGTCTCCGGCATCATTGCATCACAGGTTGATGTAGAAGTGGTATTTGAAATATCCGAAGTAGAAAGTGCAGAATGGTTAGATCCAAAGGGTGTTGATCCACAAATACTATGTAGCAAAAAAGAAGATGGATCAAGAAGTGGCAAAATTGGACCATTTGGTTTGTTAGCTTTGGCATCAGAGGATCTCCGAGAGCAAACTTCAGTGTTCTTTCAAATCTATAAAGCTCCAAATAGATATGTAGGCCTAATGTGTAGTGATCAAAGCAGGTCTTCATTAAGAGATGACCTTGATAAAACTACATATGGAACTTTCTTTGACATAGATCCTACTCAAAAAACAATTTCTCTTAGAACATTGATTGACCACTCTATTGTTGAAAGTTTTGGAGATGAAGGGAGGATTTGTATCACCAGTAGAGTTTATCCTTCTTTGGCTATAGACAAAAATGCTCATCTTTTTGTATTTAATAATGGGATTCAAACTATGCAAATTTCAAAATTAAATGCTTGGAGCATGAAGCAAGCACAAATTGGCTATGAGGGCAATATAAGTTGTGTTTGA 1749 0.3676 MMKNFATLILLALFLFILQNGNRIEAFPDRIISSSSINQPYRTSYHFQPPKNWMNDPNAPMYYKGVYHLFYQHNPYAATFGDRIVWAHSVSYDLINWIHLNNAIEPSEPFDINSCWSGSATILEGGEKPFILYTGIDENKHQVQNLAIPKNASDPFLREWIKLPQNPVMKPPIGVELNNFRDPSTAWLGNDGKWRVVVGAQNGDQGKVILYHSKDFVDWKVDSRPFFATDNTGVCECPDFFPVLIKGENGVDTSFDHQDPNFVRHVMKISYLSRLHDYYFLGNYNVFGDNENFVPDIKFTGTSSDLRYDYGKFYASKSFFDYAKNRRILWGWVNESDSTQDDIQKGWAGIQSIPRQIWLDKSGKRLVQWPIEEIEKLHDKQVSISKENLLSGSTLQVSGIIASQVDVEVVFEISEVESAEWLDPKGVDPQILCSKKEDGSRSGKIGPFGLLALASEDLREQTSVFFQIYKAPNRYVGLMCSDQSRSSLRDDLDKTTYGTFFDIDPTQKTISLRTLIDHSIVESFGDEGRICITSRVYPSLAIDKNAHLFVFNNGIQTMQISKLNAWSMKQAQIGYEGNISCV* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4026 582 SUPERFAMILY Concanavalin A-like lectins/glucanases 370 570 IPR013320 -
Amo16g4026 582 SMART glyco_32 46 528 IPR001362 GO:0004553|GO:0005975
Amo16g4026 582 Pfam Glycosyl hydrolases family 32 C terminal 374 567 IPR013189 -
Amo16g4026 582 CDD GH32_Fruct1-like 52 359 - -
Amo16g4026 582 Gene3D - 382 568 - -
Amo16g4026 582 Pfam Glycosyl hydrolases family 32 N-terminal domain 46 370 IPR013148 -
Amo16g4026 582 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 36 575 - -
Amo16g4026 582 Gene3D Glycosyl hydrolase domain; family 43 50 381 IPR023296 -
Amo16g4026 582 ProSitePatterns Glycosyl hydrolases family 32 active site. 46 59 IPR018053 GO:0004553|GO:0005975
Amo16g4026 582 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 36 575 - -
Amo16g4026 582 SUPERFAMILY Arabinanase/levansucrase/invertase 37 371 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4026 Amo-Chr16 152433674 152437132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g4026 51 573 Glycoside Hydrolase AT1G55120 57.331 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4026 K01193 - gmx:100777487 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4026 16 152433674 152437132 Amo16g4026 16 152433674 152437132 ECH