Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4005 ATGAAGCTTTGGTGCTTTCTATGCTTCAACGAAGAAGAAGAGGTAGAAGATAAAAAGAGTGATAACAATCTAATGAAGCGTAACGAAGAGGACATCTTCAGAAACGACGACGTCGTTTCGGGGACGGCGATTCCTGTCGACGAAGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGAGGAAGAGGGAGAAGACGGCGTTTACGACGATGCCGCCGCTGCTCTCGTTTTTGGAAATGACAACGACGAACGACCTGCTGTGCCGGTTTCCGGTGAGCTATTCCGGTTGTTCGAGGGCTATGGGTTCGGTTCATGGGCCGGTCCGCGCCGGTCCGAGGGAGAGAGCAGCTCCGGTTCTTCTGCTGCTCCCACCGGTTCGGAGAGCCACAAGCGGCCCAAGGTTTACGCTGATTTCGGTGAATGTCATTATGCAACCTCTGCGTCTTTGAATACTGGGAAGTCCACTGCATCTGCTGACTATGGAGATTATGATTATCTTCAAGGCTCGTCTCTTCAACCGACAAGTGATGTATGTTATGATGATTTTACATTGATGTGTACTGGTGAGGAGAATGGCTTTAATGCGAGCTGCGTGAAAGACGGCGAAGGAGACGATAGTGACATTTCAAAGGGAGAAGACCTAGAAGTCAGGATGGATCTCACAGATGACTTGCTGCATATGGTGTTCTCATTTTTGGATCATCCCAACCTTTGCAAAGCTGCCAGAGTTTGTAAGCAGTGGCGAGTTGCTAGTGCTCACGAAGACTTCTGGAAGAGTTTGAATTTTGAAGATCGGAATATATCTGTAGAACAATTTGAAGACATGTGTAGGCGGTATCCAAATGCTACAGCAATGAGCATATCTGGTCCAACTATTTACTTGCTGGTCATGAAAGCTATCTCTTCATTGCGGAATCTTGAGGTGCTAACCTTAGGAAGAGGACAGATAGCAGATACTTTTTTTCATGCGTTAGGTGATTGTTCTATGTTGAAGAGATTGAATATCAATGATTCTACACTTGGAAATGGCATTCAGGAGATATCTATTAACCATGAGAGATTGTGCCATATTCAGTTAACCAAATGCCGTGTGATGCGAATAGCAGTCAGGTGCCCACAGCTAGAAACCATGTCACTGAAGCGTAGTAACATGGCACAGGTGGTTCTTAATTGCCCTTTGTTGCATGAGCTTGATATAGGTTCTTGTCATAAACTTCCTGATGCTGCAATTCGAGCGGCTGCGACTTCATGCCCACAACTAGCGTCTCTAGACATGTCTAATTGTTCGTGTGTTAGTGATGAAACTCTGCGTGAAATAGCACTGAGTTGTGCTAACCTTAGTTTTCTTGATGCATCATATTGCCCAAATATATCTTTGGAGTCGGTTAGACTGCCAATGTTGACTGTTTTGAAGCTTCACAGCTGCGAGGGAATCACTTCAGCCTCAATGGCTGCAATAGCTCATAGTTATATGTTGGAGGTTTTGGAGCTTGACAATTGCAGTCTATTGACTTCAGTGTCTTTGGATCTACCACGTTTGCAGAATATTAGACTGGTACACTGTCGCAAATTTGTTGACTTGAACTTGAGGACACTAATGTTGTCTTCTATACTGGTGTCCAACTGCCCTGCGCTTCACTGTATCAACATCACTTCAGATTCACTAAAAGAATTAAAATTACAAAAGCAGGATAGTTTGACAACATTAGCTCTGCAATGCCAGTCATTGCAAGAAGTGGACCTTTCTGAGTGTGAATCTTTGACGAATTCAATTTGTGATGTTTTTAGTGATGGTGGAGGTTGTCCTATGTTGAAATCATTAGTTCTTGATAATTGTGAGAGTTTAACATCAGTCCGATTCAACAGCACCTCGTTAGTGAGTCTTTCTCTCGGTGGATGTCGTGCAATTACTACCCTTGAGCTTAAATGTCCTAAGCTTGAGAAGGTTATTTTAGATGGTTGTGATCATTTGGAAAGAGCATCATTTTGTCCTGTTGGTCTTCGGTCTCTCAATTTAGGAATATGTCCAAAATTGAACATTCTCAGCATTGAAGCATCGTCGATGGTCTCACTTGAGCTGAAAGGTTGTGGTGTACTATCTGAGGCATCCATTAATTGTCCTCTCTTGACATCTCTGGATGCTTCCTTTTGCAGCCAACTCACAGATGCCTGCTTGTCTGCTACAACTGCTTCATGCTCCCTGATTGAGTCACTAATATTGATGTCTTGCCCATCGATTGGTTTACGTGGTCTCCGTTCTCTGCAGTTTCTTCCAAATTTGACTCTCCTCGATTTATCATACACTTTCTTGGTCGACTTGCAGCCTGTTTTTGAGTCTTGTTCACAGCTAAAGGTATTGAAGTTGCAGGCGTGCAAATATCTCACAGATTCATCCCTTGAACCTCTTTACAAGGGGGGTGCTTTACCAGCACTACAAGAGTTGGACCTGTCATATGGAACCCTGTGTCAGTCTGCTATCGAAGAGCTTCTTTCTTGCTGCACACACCTTACACGTGTAAGCTTGAATGGCTGTGTGAATATGCATGATTTGAATTGGGGATCCAGTCTTGGGGAGATTGCCGAAATGACTGGTGTGAAGATCCTATCCCATCCAAGTTCCTCTGCGATTGTCCACGAGTCAAGTGGGCAACCCACACGGCTACTGCAGAATCTCAACTGTGTCGGATGTCCAAATATCAGGAAAGTGTTCATTCCATTGGCAGCACATTGTGCCAATTTATTATACCTAAACCTCTCTCTCTCAAATAATTTGAAGGAGGTTGATGTTGCTTGTCTGAACCTATGCTGGCTTAATTTAAGTAATTGTGCTGCTTTGGAAGTTTTGAAGCTAGAGTGCCCAAGATTGGCCAGCCTATTCCTTCAGTCTTGCAATATTGATGAGAAAGCTGTTGAAGCCGCTATTGCTAGATGCACTATGCTGGAAACTCTTGATGTTCGCTTCTGTCCAAAGATAAGCTCAATGAGCATGGCTAGATTACGTGCTGCTTGTGCTAGTTTGAAGCGTATATTCAGCAGCTTGTCAACTTCATGA 3066 0.4384 MKLWCFLCFNEEEEVEDKKSDNNLMKRNEEDIFRNDDVVSGTAIPVDEEEEEEEEEEEEEEEEEEEEGEDGVYDDAAAALVFGNDNDERPAVPVSGELFRLFEGYGFGSWAGPRRSEGESSSGSSAAPTGSESHKRPKVYADFGECHYATSASLNTGKSTASADYGDYDYLQGSSLQPTSDVCYDDFTLMCTGEENGFNASCVKDGEGDDSDISKGEDLEVRMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRVASAHEDFWKSLNFEDRNISVEQFEDMCRRYPNATAMSISGPTIYLLVMKAISSLRNLEVLTLGRGQIADTFFHALGDCSMLKRLNINDSTLGNGIQEISINHERLCHIQLTKCRVMRIAVRCPQLETMSLKRSNMAQVVLNCPLLHELDIGSCHKLPDAAIRAAATSCPQLASLDMSNCSCVSDETLREIALSCANLSFLDASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAIAHSYMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFVDLNLRTLMLSSILVSNCPALHCINITSDSLKELKLQKQDSLTTLALQCQSLQEVDLSECESLTNSICDVFSDGGGCPMLKSLVLDNCESLTSVRFNSTSLVSLSLGGCRAITTLELKCPKLEKVILDGCDHLERASFCPVGLRSLNLGICPKLNILSIEASSMVSLELKGCGVLSEASINCPLLTSLDASFCSQLTDACLSATTASCSLIESLILMSCPSIGLRGLRSLQFLPNLTLLDLSYTFLVDLQPVFESCSQLKVLKLQACKYLTDSSLEPLYKGGALPALQELDLSYGTLCQSAIEELLSCCTHLTRVSLNGCVNMHDLNWGSSLGEIAEMTGVKILSHPSSSAIVHESSGQPTRLLQNLNCVGCPNIRKVFIPLAAHCANLLYLNLSLSNNLKEVDVACLNLCWLNLSNCAALEVLKLECPRLASLFLQSCNIDEKAVEAAIARCTMLETLDVRFCPKISSMSMARLRAACASLKRIFSSLSTS* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4005 1021 PANTHER OS10G0396666 PROTEIN 133 982 - -
Amo16g4005 1021 MobiDBLite consensus disorder prediction 17 36 - -
Amo16g4005 1021 Gene3D Ribonuclease Inhibitor 565 852 IPR032675 -
Amo16g4005 1021 PANTHER OS10G0396666 PROTEIN 133 982 IPR044703 GO:0010252|GO:1905393
Amo16g4005 1021 Coils Coil 44 71 - -
Amo16g4005 1021 MobiDBLite consensus disorder prediction 43 73 - -
Amo16g4005 1021 Pfam F-box-like 227 267 IPR001810 GO:0005515
Amo16g4005 1021 SMART LRR_CC_2 648 673 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 469 494 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 737 762 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 838 867 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 711 736 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 422 447 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 785 810 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 332 355 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 982 1007 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 578 602 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 606 636 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 957 981 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 515 540 IPR006553 -
Amo16g4005 1021 SMART LRR_CC_2 396 421 IPR006553 -
Amo16g4005 1021 MobiDBLite consensus disorder prediction 112 136 - -
Amo16g4005 1021 MobiDBLite consensus disorder prediction 115 131 - -
Amo16g4005 1021 SMART fbox_2 225 265 IPR001810 GO:0005515
Amo16g4005 1021 ProSiteProfiles F-box domain profile. 219 265 IPR001810 GO:0005515
Amo16g4005 1021 SUPERFAMILY L domain-like 704 1014 - -
Amo16g4005 1021 SUPERFAMILY RNI-like 571 803 - -
Amo16g4005 1021 MobiDBLite consensus disorder prediction 17 74 - -
Amo16g4005 1021 Gene3D Ribonuclease Inhibitor 467 547 IPR032675 -
Amo16g4005 1021 SUPERFAMILY RNI-like 246 511 - -
Amo16g4005 1021 Gene3D Ribonuclease Inhibitor 219 466 IPR032675 -
Amo16g4005 1021 Gene3D Ribonuclease Inhibitor 866 1019 IPR032675 -
Amo16g4005 1021 SUPERFAMILY F-box domain 224 254 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4005 Amo-Chr16 152121833 152129607 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4005 - - gmx:100782842 1529.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4005 16 152121833 152129607 Amo16g4005 16 152121833 152129607 ECH