Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g4004 ATGATAGCGTACCTGGAACACTTCGTTCACGGAAACGACGCCGAATCGAGGCAAGACGACACTGACGGCGACGTCGTTTCGTCCCTCGACGGCCTCGAAATCACAACAGCCACCGCCTCCGCCGGCAAAGACTTCGGCGGCACAAAATTCTCGAAGCCGCTCGCGGTCGTCCGTCCATCCTCTGCCGTCGACATCGCTCGTGCCGTCCGAGCTGCGGCGGCCACGGCGAATCTCACGGTGGCGGCTCGAGGCAACGGTCACTCCATCAACGGCCAAGCCATGGCGCACAGAGGCTTGGTCCTCGACATGCGCGCCATGGAGAATCACTGTTTTCGTTTCGGTGCTGAAAACGGTAGCGGTGGTTTGCGATACGTTGACGTTCCGGGAGGGGCATTATGGGAAGACGTGTTGAAACGGTGCGTTTCGCAGTTCGGTTTGGCGCCGAGGTCGTGGACGGATTATTTGGGTTTAACGGTTGGGGGAACGCTGTCTAACGGCGGCGTTAGCGGACAGGCGTTCCGTTACGGACCTCAGACGGCAAACGTGACGGAGATGGAGGTTGTTACTGGGAGAGGCGAAACGGTTATCTGCTCCGAAAAGCAGAATTCGGAACTTTTCTTTGCCGCGCTTGGTGGTCTTGGACAGTTCGGTATCATTACCAGAGCTAGAGTCCTTCTTCAACAAGCTCCAGACATGGGACCGCGGAAGTGGCTAGGAGTTTTGAGAGAAGGAAGAAGGTTTTTGACTACGGTGGAAGGCTTTGTCTTTGTGAACAGCGATGACCCTTGCAACGGCTGGCCCACAGTCCCCATTCACCCTAACCAACGGTTCGACCCGGTTCGTCTCCCTTCCAACGCTGGACCCGTCCTCTATTGCTTAGAACTCGCCCTTCATTATCGTCACTCCCACCATCCTTCAACTCTTGATATGGTAATTAATTACTGCCCCAATTCATTCCAAACTCTCTTTCTTTTCTTTTATATTAGGTCTTCATTCATTCTTACGATACTTTATCTAAAGTTTAATAGAAAAAGGTCCCCCCCACCCCCTTTGCATTTATTTATCAATCATCAAAACACAAATCATAAAAGTCTTGCATCATATCATATCAATTTACATACAATAATTCTTGGATTTTATTATTTAAAATTGATGATAATCAGGTGGGATAGTCGTCACTCGGTTATGGTGCCAGAAAGCAGTAACATATTCTACATAGTAGCATTGCTAAGATTTGTTCCAGCAGCACCAAAGGGACCACATGCTGAAATCTTAGTGGCACAAAACAATGCAATTATTCAATTGTGTTACAACAGAGGCTTTGATTTCAAGCTGTATCTTCCTCACTACAACTCACAAGAGAATTGGATGCGACACTTTGGGGATAAGTGGACAAGGTTCATTGATAGAAAGGCCAATTTTGATCCCTTGGCTCTTCTTGCTCCTGGCCAGAAAATTTTTTCCAGAATCCCCCAACCTTTGTCTATCACATAA 1494 0.488 MIAYLEHFVHGNDAESRQDDTDGDVVSSLDGLEITTATASAGKDFGGTKFSKPLAVVRPSSAVDIARAVRAAAATANLTVAARGNGHSINGQAMAHRGLVLDMRAMENHCFRFGAENGSGGLRYVDVPGGALWEDVLKRCVSQFGLAPRSWTDYLGLTVGGTLSNGGVSGQAFRYGPQTANVTEMEVVTGRGETVICSEKQNSELFFAALGGLGQFGIITRARVLLQQAPDMGPRKWLGVLREGRRFLTTVEGFVFVNSDDPCNGWPTVPIHPNQRFDPVRLPSNAGPVLYCLELALHYRHSHHPSTLDMVINYCPNSFQTLFLFFYIRSSFILTILYLKFNRKRSPPPPLHLFINHQNTNHKSLASYHINLHTIILGFYYLKLMIIRWDSRHSVMVPESSNIFYIVALLRFVPAAPKGPHAEILVAQNNAIIQLCYNRGFDFKLYLPHYNSQENWMRHFGDKWTRFIDRKANFDPLALLAPGQKIFSRIPQPLSIT* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g4004 497 Gene3D - 41 488 IPR016167 -
Amo16g4004 497 SUPERFAMILY FAD-binding/transporter-associated domain-like 39 226 IPR036318 GO:0050660
Amo16g4004 497 PANTHER GULONOLACTONE OXIDASE 12 492 - -
Amo16g4004 497 Gene3D - 103 231 IPR016169 -
Amo16g4004 497 ProSiteProfiles PCMH-type FAD-binding domain profile. 49 229 IPR016166 GO:0071949
Amo16g4004 497 PANTHER CYTOKININ DEHYDROGENASE 7 12 492 - -
Amo16g4004 497 SUPERFAMILY FAD-linked oxidases, C-terminal domain 214 487 IPR016164 GO:0003824|GO:0050660
Amo16g4004 497 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 249 487 IPR015345 GO:0009690|GO:0019139|GO:0050660
Amo16g4004 497 Gene3D - 235 446 IPR016170 -
Amo16g4004 497 Pfam FAD binding domain 53 198 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g4004 Amo-Chr16 152093266 152099930 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g4004 K00279 - gmx:100816566 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g4004 16 152093266 152099930 Amo16g4004 16 152093266 152099930 ECH