Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3998 ATGAAGAACAACACACTCACAGATCATGAACACTACCACCATAGCACCAGATTCCTTCACAATCCTTCTTTCTCTTCAACCCTCCTTGACCAAATCTACCGTTCCATTGACCAATCCGAACAACACAATTACACAAATACCCCCAATCACATGAACACCTTCTTCACACAAACAACTTCAAGAACAGAGAAGAACAAGAAACAGGAAACATCAACAAGAAGCACGTCACGTGACTATGACAATGACGTCACGTGCTTCAGTTCCACGTCACTTTCCTCCGATTCCAGCTCGTCCTCTTCTTCTTCCGCGGGATTCTCATCCTCCGACACGGAGTCAACAAGGCCGTCAAGGACGCGCTCGTCCTCATCGTGCTTCTTGCCTCTGAGGCCGGTGAAGACCAGCGTGTCCTTGAGGGACGAGGAGAAAGGAGACGATAATCGTCGAAAGTTCCACAGCTTTCGCCACGATTTCAAAACCGAATTAGGCGCTCTAATCGGCGGCGATCGTGGCGAAGATGATTACGAATCATTGTCCATGAAATCCAAGTCAAGAGCGTTGAAGATCTATAACAATCTCAAGAAGGTGAAGCAACCGATTTCACCCGGTGCTAAGATCACTAGCTTTCTCAACTCGATCTTCACTACTTCCAAGAAAACAAAGTGCACCAACCATGACATAAAGAATATTTATCAGAATCGATTACATGAATCAAACGACAGTTATAAAAACGTGGACAACGATGCAAAAAAGCCAAAGTCAATTCAAACTTCATTGCCTTCTACTTGTTCATTTTCGAGGTCTTGTTTGAGTAAAACTGGTCGGCTACATAGACCAAACGACATTCCAGAGGAAGAAAGAGAAGCCAAGTTAGTTCAAACTTCAACACATTCTTCTCTTTCTTCTTCTAAATCTTGTTTGAGCAAGACTCTAACTTCCGAAAGGGAAAAGCTTCGCAACGGGGCGAAAAGAACGGTTCGATTCTACCCCGTGAGCGTGATTGTGGGTGAAGAAGGAATCAATAATAAAGTTGCCACAAAAACATGGAAGAATAGCACCAACGTAGAGAAGAGCAAGGTGGTGAAAGAAGCTGCAAGGGAGTTCTTGGAAGAGTACCACAAGAACAAGAACAAGAACAATTTGGTTTCAGAAGCTTTAATGGATTTGCATAAAAATAATAATAGCAAAATAAATAATGCAAATGAAGATGATGAACACGACAACGACGATGACGATGACGTGGCAAGTTGTGCAAGTTCGGATCTGTTTGAGCTTGATCATTTGGCTGAGCTTCCTGTGTATGAAACAACTCATGTTAGCACTAATCGTGCCATTGCTAATGGTCTTGCTGTGTAG 1353 0.4316 MKNNTLTDHEHYHHSTRFLHNPSFSSTLLDQIYRSIDQSEQHNYTNTPNHMNTFFTQTTSRTEKNKKQETSTRSTSRDYDNDVTCFSSTSLSSDSSSSSSSSAGFSSSDTESTRPSRTRSSSSCFLPLRPVKTSVSLRDEEKGDDNRRKFHSFRHDFKTELGALIGGDRGEDDYESLSMKSKSRALKIYNNLKKVKQPISPGAKITSFLNSIFTTSKKTKCTNHDIKNIYQNRLHESNDSYKNVDNDAKKPKSIQTSLPSTCSFSRSCLSKTGRLHRPNDIPEEEREAKLVQTSTHSSLSSSKSCLSKTLTSEREKLRNGAKRTVRFYPVSVIVGEEGINNKVATKTWKNSTNVEKSKVVKEAAREFLEEYHKNKNKNNLVSEALMDLHKNNNSKINNANEDDEHDNDDDDDVASCASSDLFELDHLAELPVYETTHVSTNRAIANGLAV* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3998 450 MobiDBLite consensus disorder prediction 393 413 - -
Amo16g3998 450 MobiDBLite consensus disorder prediction 273 294 - -
Amo16g3998 450 MobiDBLite consensus disorder prediction 77 125 - -
Amo16g3998 450 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 60 272 IPR039621 GO:0009734
Amo16g3998 450 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 6 65 IPR039621 GO:0009734
Amo16g3998 450 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 284 449 IPR039621 GO:0009734
Amo16g3998 450 MobiDBLite consensus disorder prediction 276 291 - -
Amo16g3998 450 MobiDBLite consensus disorder prediction 42 61 - -
Amo16g3998 450 PANTHER PROTEIN BIG GRAIN 1-LIKE B 60 272 - -
Amo16g3998 450 PANTHER PROTEIN BIG GRAIN 1-LIKE B 6 65 - -
Amo16g3998 450 PANTHER PROTEIN BIG GRAIN 1-LIKE B 284 449 - -
Amo16g3998 450 MobiDBLite consensus disorder prediction 239 258 - -
Amo16g3998 450 MobiDBLite consensus disorder prediction 42 125 - -
Amo16g3998 450 MobiDBLite consensus disorder prediction 62 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3998 Amo-Chr16 152002254 152003782 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3998 - - aip:107648546 751.895