Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3993 ATGATAAAATCAAAGTTTGAGTGTGGGGATCAAGATGTTGATGGTGGTGATGTTGGAGAAGCTAACTGTGAAGATGGTCGGTTACTGCGTGACATTGAGGAAATAAGCAGAGCCCTTTACTTGAACAAGGCCCCTTCTAAGGGCTTGTTCTCTTCGTCGAATATTCGATCCAAATCTGCTGAGAAAACTCGTGTAGCAAAGCCAAAAGTTCAATTTGCTCCAGGATATGTTAGGGATGATCTGTTTGTCAAGGACAAGAAGTTGCCTTCAGCATGGAATTGGAAGAAGCCCTTGAAAGCTTTGACCCATATTGGTAGTCAGAAGTTCCATTGTTGTTTTAATCTCCATGTCCACTCGGTTCAAGGGTTGCCGTCGAATTTCAATGGCATTAGTTTGCGTGTTCATTGGAAAAGGAAAAACAGCAGTTTGCAGACACGCTCGTCAATGGTTTTTGGCGGTGCTGTTGAGTTTGATGAAACTTTGGCCCATAAGTGCTCGGTATATGGTAGCGGCAGTGGGACTAGTCATTCTGTGAAGTATGATTCTAAGCGTTTCATGATTTATGTTTCTATTGTTGGGGCACCTCAAGTTGACATAGGGCATCATGAGGTAGATCTCACAAGACTTTTGCCTCTAACTTTGGAGGCATTAAGGGGCGACAATAGTTCCGGGAAATGGACCACAAGTTTTAGATTGGCAGGAAGCGCCATTGGAGCTAGCCTACATGTTAGTTTCAGTTATCAAGTCTTAAATGATGAATTGATGAAATTCGGTGGTAGCAATCCAAATGTTCTCAACCTTATTAATTTGGAGGCTAGCAGGTCTAGTACCGCAGACAATGCTGTGGATTTTGGTTCTAGCAATAGGGACATGAAGTCTTGGCAATCTGGGAGCTATGCTCATGAGCTGCAAAATAGATTGGTTGTCCCTCATTCAGATGATGCAACATCGTGCAATGAATTATTGCTGAATTCTGGCTCAGGTCTTTCGAAGTCAATCAGTTTATTATATCAGAAACTTGATGAGCAGAACTTGGATGATCCAGCCTGGATAAACTCGAAAGATTTGGAACCAATTAGGACCAAAATTCCTCTGAAATCGGAGTTTCCTGAAGAATCAATTGAACATGAGTGTGATGACACAGAGTCTGATGACACTGAGTTTTCCATTATTGAACAGGGTGTAGAAACATCGGATGGTAATTCCATGCAACCTGATCAGGAAAGAACTAAAACAATTGATGTATCTACGGTTGAAATCATTAATGTGGATGAGATTATTAAGGACGACGACATAGATTTAGACAGAAACACAAGATGTGATTCAAGGGATAACATATGTCATAGTTGCTTGAACGGGGCGATTGCAGATGACAGCAAACTTAACTGCAGTAGCACATGTGCCGATCAAACTTCCATGAAAGCAGTGGATACAGCTCATGAGACATCACCGGAGTTGGTAGTTTTAGATAACTTGGATGCTTTATGGCCAATGCATGAGTTTCTACATCACGAACAACACCAGTTGAGTCTCCAGTCTGATTATAAAACACATAGAACATTGAAAAAGTCACATAGCTTGGATGATTTCACTGAATCTGTGGCAAATGATTTCTTGAACATGCTTGCTACGGAGAGTGACACGTTTGACTTGGGTTGCCATGGTGATCCACAATCTCCTAGAGAACAGCTTTTAAGCCAGTTTGTAGAAGAGGCTCTGTCTTCAGGTAACTTCAGTCTTTATTTCGATGCAAATAAGGAGGAATTGGGAATAGATATAGATACACTTGGAGCGGGTAGGGAAGATTTTGCTGCGGATTCTGAATTGTCTTTAACTATTCAATCTGCTGAGGAGGATCATGAAAGGGCGAGTCGGTTATTACTCCATAGAAGGAATGCTAAAATGCTTGAAGATCTAGAGACTGACTCATTGATGCAACAATGGGGATTAAATGAAAAGGACTTTGAAGATTCTCCTGGAACGTGGTCCGGTGGATTTGGAAGTCCAATTGAGTTACCGAATGAAGAATCATCGATGTTACCTTCAATTGAAGAAGGGCTTGGTTCATTTGTTGAAACAAAGGATGGAGGCTTTCTCAAGTCCATGAGTCCTTCCCTCTTCAGACATGCTAAAAATGGTGGGAAGCTAATCGTTCAAGCTTCTAATCCACTTGTTCTACCTGCAGAAATGGGTAATGATGTATTGGAGATACTTCTGCATATGGCATCTGATGGAGTTGAGGATCTGTATAATCATATCTACAAATTAATGCCTTTGGAAGATATCACTGGAAAATCCATTAAGCGAATTGCGTGGGAAGCTACAACTGACATGAGATCTCCTAGAAGGCATGAATTTCCACATGGTTATGTAATTAATCAAGGCATAGACTTCAATTCCTTATCCCTAGAAGCTATAGCTCCTATAGCTATTGGTATGATTGAAACCCTTTTGATAGAAGGGTTAAGAATACAATCTGGCATGTCGACTGTGGCGGCACCATCAAGCATTCGTCCCCAGCAGCATATGGGGATTGTTGATGTTAATGGATTGATAGGTCTGTCAGTGACATTGGATCAGTGGTTGAGATTGGATTCTGGGATTATTGAAGGAGATTTGGAGCAAATTTTAAAGGTCCTTAAAGCTCATCATTCGAAAATCTCGGAATTAGACGATGAAGTGTTGGAAAAGGCCATGGACAGGGTAAGAATATATGGCAGCGAATACAGACTCTTTGGAAACCACATAACAGTGGCTTGCATGATCCAGCTTAGGGATCCCCTACGAAATTACGAACCTGTTGGCGTTCCGATGCTGGTTTTAACTCAAGTCGAAAGGGTTCACATACATGACGATGAATCGTCGCGATCCCTCAGCATTTTTCTTGAAAGACAGGATGAGGGAGCTGAGAATGAGGCCCTGCAAAATGATTCAAATGATGTAGAAAACTCAGCACCCCAGTTCAGATTTAAGATCAGTGAGATTCATCTTGCCAGTGTTACAACCAACGAAGCCGGGAAAAGGAAACTATGGGGTACCGGAGCTCAGCGGCAATCTGCATTCCGATGGTTGCGCACCACCGGCATGGATAGTAGTAGTACTGCTAAACATTCAACTTCGAAGTCAAAGGCAATTGTTAGATCGTTCCCATTGTTGACCAACAAGTTGCTGAATGAGGATATTTTATGGAGCATTTCTTGTGTTCATGATAACAAGAGGACTAGTGCTGAAAATGTACACATTCGGAACCCTGATATTATCTTTTCCAAATTGAACTAA 3279 0.4166 MIKSKFECGDQDVDGGDVGEANCEDGRLLRDIEEISRALYLNKAPSKGLFSSSNIRSKSAEKTRVAKPKVQFAPGYVRDDLFVKDKKLPSAWNWKKPLKALTHIGSQKFHCCFNLHVHSVQGLPSNFNGISLRVHWKRKNSSLQTRSSMVFGGAVEFDETLAHKCSVYGSGSGTSHSVKYDSKRFMIYVSIVGAPQVDIGHHEVDLTRLLPLTLEALRGDNSSGKWTTSFRLAGSAIGASLHVSFSYQVLNDELMKFGGSNPNVLNLINLEASRSSTADNAVDFGSSNRDMKSWQSGSYAHELQNRLVVPHSDDATSCNELLLNSGSGLSKSISLLYQKLDEQNLDDPAWINSKDLEPIRTKIPLKSEFPEESIEHECDDTESDDTEFSIIEQGVETSDGNSMQPDQERTKTIDVSTVEIINVDEIIKDDDIDLDRNTRCDSRDNICHSCLNGAIADDSKLNCSSTCADQTSMKAVDTAHETSPELVVLDNLDALWPMHEFLHHEQHQLSLQSDYKTHRTLKKSHSLDDFTESVANDFLNMLATESDTFDLGCHGDPQSPREQLLSQFVEEALSSGNFSLYFDANKEELGIDIDTLGAGREDFAADSELSLTIQSAEEDHERASRLLLHRRNAKMLEDLETDSLMQQWGLNEKDFEDSPGTWSGGFGSPIELPNEESSMLPSIEEGLGSFVETKDGGFLKSMSPSLFRHAKNGGKLIVQASNPLVLPAEMGNDVLEILLHMASDGVEDLYNHIYKLMPLEDITGKSIKRIAWEATTDMRSPRRHEFPHGYVINQGIDFNSLSLEAIAPIAIGMIETLLIEGLRIQSGMSTVAAPSSIRPQQHMGIVDVNGLIGLSVTLDQWLRLDSGIIEGDLEQILKVLKAHHSKISELDDEVLEKAMDRVRIYGSEYRLFGNHITVACMIQLRDPLRNYEPVGVPMLVLTQVERVHIHDDESSRSLSIFLERQDEGAENEALQNDSNDVENSAPQFRFKISEIHLASVTTNEAGKRKLWGTGAQRQSAFRWLRTTGMDSSSTAKHSTSKSKAIVRSFPLLTNKLLNEDILWSISCVHDNKRTSAENVHIRNPDIIFSKLN* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3993 1092 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 3 1090 IPR039614 -
Amo16g3993 1092 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 106 251 IPR019448 -
Amo16g3993 1092 ProSiteProfiles C2 NT-type domain profile. 101 249 IPR019448 -
Amo16g3993 1092 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 2 3 1090 IPR039823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3993 Amo-Chr16 151945941 151950605 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3993 - - adu:107495607 2111.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3993 16 151945941 151950605 Amo16g3993 16 151945941 151950605 ECH