Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3987 ATGGCGTTAGTTTCTTTCAACTTCTCCGTTCCATCGGTTACGATTTCTATCTCCTCCGCGTTCTCCCCCTCTTCCTCCGTCCTTCGCCGCCGTCAATGTGTTCGTTATCCTCGCACTTCCTTCCCTTCTCCGCTTCAGTTTCCGCTCAAAATCTCATGCGCTGCTGCTTCCGCCGTTTCTACTGATTCTTCTCCTCTCGCCGCAAAAACCGAGGTGAAGAAAGATTTTCTTCACATAAATGACTTTGATAAGGACACTATTTTAAATATGTTGGATCGAGCCATTGAGGTCAAGGCATTAATTAAATCAGGGGACAGGACATTTCAACCATTTAAAGGGAAGACATTGGCAATGATCTTTGCAAAGCCATCAATGAGAACGCGTGTTTCATTTGAGACTGGCTTTTCATTGTTAGGTGGCCATGCTATATATTTAGGACCTGATGATATCCAAATGGGCAAGCGAGAGGAGACTCGAGATGTTGCTCGTGTTTTGTCTCGCTATAATGATATAATCATGGCTCGTGTTTTTGCTCATCAGGACATACTTGATCTTGCCAAGTATTCAACTGTGCCAGTTGTCAATGGATTGACAGACTACAACCATCCCTGTCAAATAATGGCTGATGCCCTCACTATTATTGAGCATATTGGTCGGTTGGAAGGCACCAAGGTTGTCTACGTTGGAGATGGAAATAATATTGTCCATTCATGGTTGTTGCTGGCAGCTGTAGTTCCATTTCACTTTATTTGTGCCTGCCCAAAGGGTTTTGAACCTGATGAGAAAACTGTGGAGAAGGCACGGCAGGCTGGAATCAGCAAAATTGAGATAACTAATGATCCCAAAGAAGCTGTCAGAGGAGCTGATGTTGTTTATTCAGATGTCTGGGCCAGCATGGGACAAAAGGAAGAGGCTGCATACCGCCGTCAAGTGTTTAAAGGATTTCAGGTGGATCGAACTCTTATGGAAATAGCTGGCTCAAATGCGTATTTCATGCATTGCTTACCAGCAGAAAGAGGGGTGGAGGTGACGGATGAAGTTATTGAAGCTCCAAACTCAATTGTGTTCCCGCAAGCTGAGAACCGATTACACGCACAGAATGCCATAATGCTCTATGTGCTTGGCAAGTAA 1131 0.4456 MALVSFNFSVPSVTISISSAFSPSSSVLRRRQCVRYPRTSFPSPLQFPLKISCAAASAVSTDSSPLAAKTEVKKDFLHINDFDKDTILNMLDRAIEVKALIKSGDRTFQPFKGKTLAMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDVARVLSRYNDIIMARVFAHQDILDLAKYSTVPVVNGLTDYNHPCQIMADALTIIEHIGRLEGTKVVYVGDGNNIVHSWLLLAAVVPFHFICACPKGFEPDEKTVEKARQAGISKIEITNDPKEAVRGADVVYSDVWASMGQKEEAAYRRQVFKGFQVDRTLMEIAGSNAYFMHCLPAERGVEVTDEVIEAPNSIVFPQAENRLHAQNAIMLYVLGK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3987 376 Hamap Ornithine carbamoyltransferase, catabolic [argI]. 73 375 IPR024904 GO:0004585|GO:0006591
Amo16g3987 376 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 73 375 IPR036901 GO:0006520|GO:0016597|GO:0016743
Amo16g3987 376 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 221 372 IPR006131 GO:0006520|GO:0016597|GO:0016743
Amo16g3987 376 Gene3D Aspartate/ornithine carbamoyltransferase 205 370 IPR036901 GO:0006520|GO:0016597|GO:0016743
Amo16g3987 376 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 120 139 IPR006130 GO:0006520|GO:0016597|GO:0016743
Amo16g3987 376 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 202 213 IPR006130 GO:0006520|GO:0016597|GO:0016743
Amo16g3987 376 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 327 336 IPR006130 GO:0006520|GO:0016597|GO:0016743
Amo16g3987 376 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 339 362 IPR006130 GO:0006520|GO:0016597|GO:0016743
Amo16g3987 376 TIGRFAM orni_carb_tr: ornithine carbamoyltransferase 74 374 IPR002292 GO:0016743
Amo16g3987 376 Gene3D Aspartate/ornithine carbamoyltransferase 74 204 IPR036901 GO:0006520|GO:0016597|GO:0016743
Amo16g3987 376 PRINTS Ornithine carbamoyltransferase signature 118 132 IPR002292 GO:0016743
Amo16g3987 376 PRINTS Ornithine carbamoyltransferase signature 151 164 IPR002292 GO:0016743
Amo16g3987 376 PRINTS Ornithine carbamoyltransferase signature 191 205 IPR002292 GO:0016743
Amo16g3987 376 PRINTS Ornithine carbamoyltransferase signature 291 301 IPR002292 GO:0016743
Amo16g3987 376 PRINTS Ornithine carbamoyltransferase signature 353 364 IPR002292 GO:0016743
Amo16g3987 376 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, CHLOROPLASTIC-LIKE 15 375 - -
Amo16g3987 376 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 74 215 IPR006132 GO:0006520|GO:0016743
Amo16g3987 376 PANTHER ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL 15 375 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3987 K00611 - ini:109149455 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3987 16 151831893 151836892 Amo16g3987 16 151831893 151836892 ECH