Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3983 ATGGGAACCCTTGGGAGAGCCATATACACTGTTGGATTCTGGATTCGAGAAACCGGTCAAGCAATTGATCGCCTCGGTTCCCGTTTTCAAGGGAAATATTACTTCCAAGAGCAGCTGTCTAGGCATCGAACTCTGATGAACATATTTGACAAGACTCCTCTGGTTGATAAGGATGCATTTGTTGCCCCAAGTGCTTCCGTCATCGGTGATGTTAAAATTGGAGGTGGATCATCAATTTGGTATGGATGTGTCTTGAGAGGTGACGTGAACAGCATCAGTGTTGGTAGCGGAACCAACATACAGGACAACTCCTTAGTGCATGTTGCGAAGTCAAATTTAAGTGGAAAGGTGTTGCCTACTATTATTGGAGACAAAGTTACTGTAGGTCATAGTGCTGTTCTACATGGTTGCGTCGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAACACTACTTGACGGTGTTGTTGTTGAGAAACATGCAATGGTTGCTGCTGGATCCCTTGTGAGACAGAATTCAAAGGTTCCAAGTGGAGAGATATGGGCAGGCAATCCAGCAAAGTTCCTGAGGAAGCTCACTGATGAAGAGATAGCTTTTATCTCCCAGTCAGCCACCAACTATACTAACCTCGCTCAGGTGCACGCAGCAGAAAATGTGAAATCATTTGATGAAATCGAGTTTGAGAAGGGGTTACGAAAGAAGTATGCACGTAAGGACGAGGAGTATGACTCAATGCTCGGTGTTGTCCGTGAGATTCCTCCAGAGCTTATTCTTCCAGATAATATCCTACCGAAACAACAAGAAAAGTCTCTTAAAATTTGA 822 0.444 MGTLGRAIYTVGFWIRETGQAIDRLGSRFQGKYYFQEQLSRHRTLMNIFDKTPLVDKDAFVAPSASVIGDVKIGGGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDKVTVGHSAVLHGCVVEDEAFVGMGATLLDGVVVEKHAMVAAGSLVRQNSKVPSGEIWAGNPAKFLRKLTDEEIAFISQSATNYTNLAQVHAAENVKSFDEIEFEKGLRKKYARKDEEYDSMLGVVREIPPELILPDNILPKQQEKSLKI* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3983 273 Gene3D Hexapeptide repeat proteins 43 222 - -
Amo16g3983 273 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 270 - -
Amo16g3983 273 PANTHER DYNACTIN SUBUNIT P25 1 270 - -
Amo16g3983 273 CDD LbH_gamma_CA_like 55 212 - -
Amo16g3983 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Amo16g3983 273 SUPERFAMILY Trimeric LpxA-like enzymes 47 213 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3983 Amo-Chr16 151783856 151788246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3983 120 196 Miscellaneous Gene Families AT2G17640 34.884 2.81e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3983 K01726 - rcu:8288953 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3983 16 151783856 151788246 Amo16g3983 16 151783856 151788246 ECH