Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3943 ATGCTGGTAGAAGCAATGGAAACTTCAATAGCAAATGGTGCTGCTAGTGCTGTTACTAATACTGCTTCTGCTGCTTTCACTCATCACCATAATCACCACCACCATAATCTCCACCATAATAATAATAATAATAATCAGCTTCATCATCAGCAGAGTGGCTTCTACGGTGATAGCAGCGAAGAGGAACTATCGGTGCTTCCTCGCCACACCAAAGTCGTTGTAACTGGCAACAACCGCACCAAATCCGTGCTCGTTGGTCTTCAAGGCGTTGTTAAGAAAGCCGTTGGTTTAGGAGGATGGCACTGGCTGGTTCTTACAAATGGAATTGAAGTGAAGCTGCAAAGGAATGCACTTAGCGTGATTGAAGCTCCCACAGGAAATGAGGAAGATGACGACCTTGAATTTGAAAATGTGCAGTGGAATGGATCAGATATGGCATCAGATGACACTCAAAAGTCCCACAAATCGAGGCATAGAACGCATAGATCGTTGGGATCGTCTCACAAGACTATGAGCAGGTCCTTCTCCGGTGATTCACAATCTAAGGGGTCCATTTCAATGCCGCATGGAGGGACGAAGGTTGACCTGAGTAAATTGGAGATGGCTGCATTATGGAGATATTGGAGACACTTCAATCTGGTTGATGCAGTTCCAAACCCATCAAAAGAGCAGCTAGTGGATGTTGTTCAGAGGCATTTCATGTCACAGCAAATGGACGAATTGCAAGTGATTATGGGATTTGTCCAAGCTGCAAAGAGGCTTAAGACAGTGTGCAAATGA 780 0.4487 MLVEAMETSIANGAASAVTNTASAAFTHHHNHHHHNLHHNNNNNNQLHHQQSGFYGDSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAPTGNEEDDDLEFENVQWNGSDMASDDTQKSHKSRHRTHRSLGSSHKTMSRSFSGDSQSKGSISMPHGGTKVDLSKLEMAALWRYWRHFNLVDAVPNPSKEQLVDVVQRHFMSQQMDELQVIMGFVQAAKRLKTVCK* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3943 259 MobiDBLite consensus disorder prediction 167 187 - -
Amo16g3943 259 MobiDBLite consensus disorder prediction 142 191 - -
Amo16g3943 259 MobiDBLite consensus disorder prediction 30 61 - -
Amo16g3943 259 Pfam Sin3 binding region of histone deacetylase complex subunit SAP30 199 252 IPR025718 GO:0005515
Amo16g3943 259 PANTHER HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30 SIN3-BINDING PROTEIN 47 259 - -
Amo16g3943 259 MobiDBLite consensus disorder prediction 40 58 - -
Amo16g3943 259 Gene3D - 174 259 IPR038291 -
Amo16g3943 259 PANTHER SAP30 47 259 IPR024145 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3943 Amo-Chr16 151339091 151343223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3943 - - adu:107495972 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3943 16 151339091 151343223 Amo16g3943 16 151339091 151343223 ECH