Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3800 ATGGAAAATGGATCCCTGAAACTCTTCAAGTGGATTGAGATCGGAGAGATTCAGAGCGAGAGAGATACGAATCGGAAGAAACCGAAGAAGAAGACTGAGTCAGTTGTGAAAATGGAAAAATATCTGTCCGCCATTGGTATTGACGTCAGCTGCGCGCTCAATTCTCTCCGCCATGGAACCATCCCTCACAAAGACTGCCTCCTCCCTCTCATCTCCAAGCTCCTCGGCTACGCCATCGTCGCCGCTTCCACCACCGTCAAGCTCCCTCAGATTATGAAGATTCTGAAGCACCAGAGTGTGAGAGGTCTTAGCATGATATCCTTCGAGCTTGAGGTTGTTGGTTATACCATAGCACTGGCTTACTGTCTCCACAAGGGGCTTCCCTTCTCTGCTTATGGGGAACTGTTGTTTCTMTTGATCCAAGCTTTAATTTTGGTTGCCATAATCTACTACTATTCTCGACCTTTGCGTACCACAACATGGATCCGAGCATTAATATATTGTGCTGTAGCACCWACTATCTTAGCTGGTCAAATTGATCCTTTTCTCTTTGAGGCTTTGTATGCATCCCAGCATGCGATCTTTCTCTRTGCCAGAATCCCTCAAATATTGAAAAACTTTTCTAACAGGAGTACAGGGGAGCTCAGCTTCTTAACTTCTTTGATGAATTCTGCAGGTTCAATGGTTAGAGTATTCACAAGCCTCCAAGAAAATGCACCAAAAAGTGTTGTAATGGGTTCCGCAATTGGTGTTGCTACAAATTTCACCATCCTAAGCCAGATATTGTTCTACCAAAAGCCAAGGGTCACTGAGAAAGAGAAGAAAAACGAAATAGAAAGAACTATACAAAGTCATGTATACTGCTACTTCAGAGTTCCTCGTGTTCATCTTTCAACAGGTGCTACGTCCTTGAAAGCCATACTCAGAAGTTTATCACTGTTGAATTGA 948 0.4357 MENGSLKLFKWIEIGEIQSERDTNRKKPKKKTESVVKMEKYLSAIGIDVSCALNSLRHGTIPHKDCLLPLISKLLGYAIVAASTTVKLPQIMKILKHQSVRGLSMISFELEVVGYTIALAYCLHKGLPFSAYGELLFLLIQALILVAIIYYYSRPLRTTTWIRALIYCAVAPTILAGQIDPFLFEALYASQHAIFLXARIPQILKNFSNRSTGELSFLTSLMNSAGSMVRVFTSLQENAPKSVVMGSAIGVATNFTILSQILFYQKPRVTEKEKKNEIERTIQSHVYCYFRVPRVHLSTGATSLKAILRSLSLLN* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3800 315 Pfam PQ loop repeat 192 242 IPR006603 -
Amo16g3800 315 Pfam PQ loop repeat 71 130 IPR006603 -
Amo16g3800 315 Gene3D - 69 153 - -
Amo16g3800 315 SMART ctns 85 116 IPR006603 -
Amo16g3800 315 SMART ctns 197 228 IPR006603 -
Amo16g3800 315 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 41 266 IPR016817 -
Amo16g3800 315 Gene3D - 192 279 - -
Amo16g3800 315 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 41 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3800 Amo-Chr16 149493429 149497229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3800 42 264 Miscellaneous Gene Families AT4G07390 75.336 3.59e-123 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3800 K09660 - gmx:100787632 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3800 16 149493429 149497229 Amo16g3800 16 149493429 149497229 ECH