Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3768 ATGGCTTCTTCTATGGCTTTCTCTGCCGCCACCTTCTTCACTACTACTCAAGCTAGAACAGCAAATTCAAATTCTTCTTTTTCTTCGCCATCTATTCCCTTTATCAAACCCTCCTCCTTTGGTTCCTCCAAGTCAGTGTTTTTTCAAAATGGGTTTTCTTTGAACTCATCCAATCTTCCTGGGTTTGTAGTAAAGCCTCGATCTTTTTCAGTTAATGCAAGAGCAGCCACTGAGAAAACCATTTATGATTTTACAGTCAAGGATATTGATAAAAAGGATGTTCCTCTTAGCAAATTTAAGGGCAAGGTTCTCTTGATTGTCAATGTTGCTTCAAGATGTGGTTTGACATCATCGAACTACTCGGAACTGGCACGCTTATATGAGAAATATAAAAATAAAGGTTTGGAGGTTCTAGCATTCCCCTGCAATCAGTTTGGTATGCAGGAGCCTGGATCTAACCAAGAAATTAAGCAGTTTGCTTGCACTCGATTTAAAGCAGAATTTCCCATTTTCGATAAGGTTGATGTGAATGGACCATTTACGGTTCCAGTTTACCAGTTTCTGAAATCAAATGCTGGAGGCTTTCTAGGTGATCTTATCAAGTGGAACTTCGAGAAGTTCTTGGTTGATAAAAATGGTAAAGTTGTTGAAAGATATCCGCCAACTACCTCACCTTTCCAAATTGAGAAGGATATCCAGAGGTTACTTGCTGCATGA 717 0.3933 MASSMAFSAATFFTTTQARTANSNSSFSSPSIPFIKPSSFGSSKSVFFQNGFSLNSSNLPGFVVKPRSFSVNARAATEKTIYDFTVKDIDKKDVPLSKFKGKVLLIVNVASRCGLTSSNYSELARLYEKYKNKGLEVLAFPCNQFGMQEPGSNQEIKQFACTRFKAEFPIFDKVDVNGPFTVPVYQFLKSNAGGFLGDLIKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQRLLAA* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3768 238 Gene3D Glutaredoxin 67 238 - -
Amo16g3768 238 PANTHER GLUTATHIONE PEROXIDASE 22 238 IPR000889 GO:0004602|GO:0006979
Amo16g3768 238 PRINTS Glutathione peroxidase family signature 200 209 IPR000889 GO:0004602|GO:0006979
Amo16g3768 238 PRINTS Glutathione peroxidase family signature 135 151 IPR000889 GO:0004602|GO:0006979
Amo16g3768 238 PRINTS Glutathione peroxidase family signature 99 116 IPR000889 GO:0004602|GO:0006979
Amo16g3768 238 CDD GSH_Peroxidase 80 232 IPR000889 GO:0004602|GO:0006979
Amo16g3768 238 ProSiteProfiles Glutathione peroxidase profile. 71 238 IPR000889 GO:0004602|GO:0006979
Amo16g3768 238 ProSitePatterns Glutathione peroxidases signature 2. 138 145 IPR029760 -
Amo16g3768 238 ProSiteProfiles Thioredoxin domain profile. 75 237 IPR013766 -
Amo16g3768 238 PANTHER PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC 22 238 - -
Amo16g3768 238 Pfam Glutathione peroxidase 81 189 IPR000889 GO:0004602|GO:0006979
Amo16g3768 238 ProSitePatterns Glutathione peroxidases active site. 101 116 IPR029759 -
Amo16g3768 238 SUPERFAMILY Thioredoxin-like 80 237 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3768 Amo-Chr16 149111804 149116274 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3768 K00432 - gmx:100305775 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3768 16 149111804 149116274 Amo16g3768 16 149111804 149116274 ECH