Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3767 ATGGGTTCTGTGAGCAGAATTGATTCGAAGCCTCATGCTGTGTGCATAGCATACCCAGCACAAGGCCACATAACTCCAATGCTGAAGCTAGCAAAGCTTCTTCACAACAAAGGCTTCCACATAACTTTTGTTAACACTGAATACAATCACAGACGTTTTCTCAGATCAAGAGGACCCGATTCGCTCAAAGGCCTTCCCTCGTTCCGATTCGAAACCATCCCAGACGGCCTTCCTCAGGACCCTGACGACCATGCTGACGTCACTCAGGACGTGCGTTCTCTGTGTGAGTCCACAAGAACGACTTGCTCTCCGCACTTCAAGAAGCTCATTTCCAAGCTCAATAGTGATGGCGGTGTTCCTCCTGTGACTTGCATTGTGTCTGATAGCATCATGAGTTTCAGTGCTGATGCTGCTGAAGAATTTGGCATCCCTTTGGTGATGTTTTGGACTGCAAATATGAGCTATGTCACAAATGGATATTTGGAGACTACCCTAGATTGGGTGCCCGGAATTAAAGAAATTCGATTGAGGGATATGCCCAGCTTCCTCAGAACCACAGACCTAAAAGATATTATGCTTGATTTCTTCATAGGAGAGTGTGCAAGAGCTCACAAAGCTTCAGCAATAGTAATGAACACATTTGATGCTTTGGAGCATGATGTTTTGGAAGCATGTTCTTCCATTCATAACATGCCTCCTATTTATCCCATTGGTCCCTTGAATTTTCAACTGAACCACTTCAACAACGAGCACTTAAACAAAATTTCATCCAACCTTTGGAGAGAGGATCTAGAGTGTCTTGAATGGCTAGACAAACAAGAGCCCAATTCAGTTGTGTATGTGAACTTTGGTAGCATCACAACTATGACCAATGAAAACTTAATAGAGTTTGCTTGGGGACTTGCCAATAGCAACAAAAAATTCTTTTGGGTAATTAGGCCAGATCTTGTGGCTGGTGAAATTGCTGTGTTACCTCCTGAATTTGTGGAAGTGACAAAAATTAGAGGCATGTTAGCAAATTGGTGTCCCCAAGAACAAGTTTTGGCTCACCCTTCAATTGGGGTGTTTTTGACACACAGTGGTTGGAACTCAACATTGGAAAGTGTGTGTGGTGGTGTGCCAATGATATGTTGGCCCTTCTTTGCTGAGCAACAAACCAATTGTAGGTTTTGTAATAAGGAGTGGGGAATTGGGTTGGAGATAGAAGATGTTAGGAGGGAGAAAATTGAAAGCCTTGTGAGGGAGTCAATGGATGGAGAGAAGGGTCAAGATATGAGACAAAATGCTTTGCAATGGAAGAAATTAGCCAAGGATGCTGCATCTGCCCCACATGGATCCTCATTTCAGAATCTAGAGAATGTGCTTCATCAAGTTCTATTGAACAATTTCACTACTACAAAGTAG 1404 0.4316 MGSVSRIDSKPHAVCIAYPAQGHITPMLKLAKLLHNKGFHITFVNTEYNHRRFLRSRGPDSLKGLPSFRFETIPDGLPQDPDDHADVTQDVRSLCESTRTTCSPHFKKLISKLNSDGGVPPVTCIVSDSIMSFSADAAEEFGIPLVMFWTANMSYVTNGYLETTLDWVPGIKEIRLRDMPSFLRTTDLKDIMLDFFIGECARAHKASAIVMNTFDALEHDVLEACSSIHNMPPIYPIGPLNFQLNHFNNEHLNKISSNLWREDLECLEWLDKQEPNSVVYVNFGSITTMTNENLIEFAWGLANSNKKFFWVIRPDLVAGEIAVLPPEFVEVTKIRGMLANWCPQEQVLAHPSIGVFLTHSGWNSTLESVCGGVPMICWPFFAEQQTNCRFCNKEWGIGLEIEDVRREKIESLVRESMDGEKGQDMRQNALQWKKLAKDAASAPHGSSFQNLENVLHQVLLNNFTTTK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3767 467 PANTHER GLYCOSYLTRANSFERASE 154 458 - -
Amo16g3767 467 CDD GT1_Gtf-like 11 444 IPR002213 GO:0008194
Amo16g3767 467 Gene3D Glycogen Phosphorylase B; 255 438 - -
Amo16g3767 467 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 56 - -
Amo16g3767 467 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 154 458 - -
Amo16g3767 467 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 452 - -
Amo16g3767 467 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 92 440 IPR002213 GO:0008194
Amo16g3767 467 ProSitePatterns UDP-glycosyltransferases signature. 341 384 IPR035595 -
Amo16g3767 467 Gene3D Glycogen Phosphorylase B; 12 441 - -
Amo16g3767 467 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 56 151 - -
Amo16g3767 467 PANTHER GLYCOSYLTRANSFERASE 56 151 - -
Amo16g3767 467 PANTHER GLYCOSYLTRANSFERASE 7 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3767 Amo-Chr16 149103586 149108095 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3767 10 463 Glycosyltransferase AT1G22340 54.262 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3767 - - gmx:100784251 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3767 16 149103586 149108095 Amo16g3767 16 149103586 149108095 ECH