Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3765 ATGGTTTCTTGGGAAAAACCCCATGCTGTATTAATTCCATACCCAGCACAAGGTCACATAAACCCAACCCTAAAACTAGCAAAGCTTCTTCACCACAAAGGCTTCCACATCACTTTCGTTAACACTGAATACAATCACAATCGCCTTCTCAAATCCAGAGGCTCCGACTCACTGAAAGGTCTATCCTCCTTCCAATTCGAAACCATCCCCGACGGTCTACCTGTGGACCCTAATCATGGGGATGCAACGCAGGATATACCTTCTTTGTGTAAGTCCACAACAACAACTTGTTTGCCACACTTGAAGAACCTCATTTTGAAGCTGAATGACCAAGTTGTTCCTCGTGTTAGTTGCATAGTGTGCGATGCTGTGATGAGTTTTGGAATTGATGCTGCTCAAGAATTGGAAATCCCTGTGGCCGTTTTCTGGACAGCAAGTGCTTCTTCGTTCACATGTTGCATACAATATTCTCAGCTTCTTCTTAAAGGCTTAGTACCCCTCAAAGACTCAAGTTATCTCACAAATGGGTATTTGGAAACTACAATAGATTGGGTCCCCGGAATAAAAGAGATTCGTTTGAGGGATATTCCCAGTTTCATCCGAACCACAGATCCAAATGATATTATGCTCAACTTTTTTCTAAGAGAAATGGAGAGATCTCAAAGAGCTTGTGCAATCATAATAAATACATTTGATGCCTTGGAGGGTGATATTTTGGAGGCATTCTCCTCCATTAATAGTTTGCCACCTGTCTATTCCATTGGTCCTATGGATTTTCTCTTGAACCATATCACTGACCATGAATTGAATAAAATTGGATCCAACCTTTGGAAGGAGGATCAAGAATGCATTAAATGGTTAGACAAACAAGAACCAAATTCAGTGGTGTACATAAACTTTGGTAGCATCACAACTATGACCAATGAAAATTTAATAGAGTTTGCTTGGGGAATTGCCAATTGCAACAAAAAGTTTTTGTGGGTCATTAGGCCAGATCTTGTGGCTGGTGAAAATGCTATTCTTCCTAATGAATTTCATGAGGAGACTAAAGTTAGAGGCATATTATCAAATTGGTGTCCCCAAGAAGAGGTTTTGGCGCACCCTTCAGTTGGGGTGTTTTTGACACATAGTGGTTGGAACTCAACATTGGAAAGTGTGTGCAATGGTGTGACAATGATATGTTGGCCATTCTTTTCGGACCAAATGACCAATTGTAGATTCTCTTGTAATGAATGGGGAATTGGGTTGGAGATAGAAGATGTTAAGAGGGAGAAAATTGAAAGTCTTGTGAGGGAGTCAATGGATGGGGAAATGGGTCAACAGATGAAAGAAAATGCTTTAAAGTTGACGAAATTGGCAAAGGATGCTGCTTCTGACCCAAATGGATCCTCGTTTCAAAATTTAGACAAGGTGATTCATGATGCACTATTGAGCAAATTTGCTAAAAATTAG 1452 0.4036 MVSWEKPHAVLIPYPAQGHINPTLKLAKLLHHKGFHITFVNTEYNHNRLLKSRGSDSLKGLSSFQFETIPDGLPVDPNHGDATQDIPSLCKSTTTTCLPHLKNLILKLNDQVVPRVSCIVCDAVMSFGIDAAQELEIPVAVFWTASASSFTCCIQYSQLLLKGLVPLKDSSYLTNGYLETTIDWVPGIKEIRLRDIPSFIRTTDPNDIMLNFFLREMERSQRACAIIINTFDALEGDILEAFSSINSLPPVYSIGPMDFLLNHITDHELNKIGSNLWKEDQECIKWLDKQEPNSVVYINFGSITTMTNENLIEFAWGIANCNKKFLWVIRPDLVAGENAILPNEFHEETKVRGILSNWCPQEEVLAHPSVGVFLTHSGWNSTLESVCNGVTMICWPFFSDQMTNCRFSCNEWGIGLEIEDVKREKIESLVRESMDGEMGQQMKENALKLTKLAKDAASDPNGSSFQNLDKVIHDALLSKFAKN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3765 483 PANTHER GLYCOSYLTRANSFERASE 4 53 - -
Amo16g3765 483 PANTHER GLYCOSYLTRANSFERASE 52 476 - -
Amo16g3765 483 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 469 - -
Amo16g3765 483 CDD GT1_Gtf-like 7 468 IPR002213 GO:0008194
Amo16g3765 483 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 209 460 IPR002213 GO:0008194
Amo16g3765 483 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 52 476 - -
Amo16g3765 483 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 4 53 - -
Amo16g3765 483 Gene3D Glycogen Phosphorylase B; 278 455 - -
Amo16g3765 483 Gene3D Glycogen Phosphorylase B; 8 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3765 Amo-Chr16 149063343 149065525 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3765 5 480 Glycosyltransferase AT1G22380 57.292 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3765 - - gmx:100784251 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3765 16 149063343 149065525 Amo16g3765 16 149063343 149065525 ECH