Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3731 AAAAACACAAAGCAGGTCAAAAAAAAAAAGTTAAAAGCAAACGAGCTTGTTGCGAACAAAAAAAGGAGCTTCTCATTTTATTTACCAACTCGTCTCTTTGAAACCCGACCCGAATCAGCAGCGCCAAGCTTCTCAAACTCGCTCTCAGTTTCCATTTTTTCCTTTTCTCTAACAGAACAAACATCAAACACCTTCTCTGCACAAAACAGCAGAGACATAAGTTTTGAAAACATGCAACGTTTGAAAACTCTGCTGCCTGAAAAATGTAGATTCTCTCTTCGCACACTATGCTCTCATCCTCGAGCTTTCTCTGCTCAAGTGCACCACCATATCGATGATGATCACGATGATCCCCAACGGCAGATTTTGGTTGAAGGAAGAGCGAAATCGAGAGCAGCTATACTCAACAGGCCATCTTCACTGAATGCGCTCACAACTTCAATGGTTGCTAGGCTTAAGAGGCTGTATGATTCGTGGGAAGAAAATTCTGACATTGGCTTTGTCTTAATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTGTTAGGCTGTATAACTCACTGAATGAAGGAAATGTTGAAGAAGCTGAACAGTTTCTCAGAACATTATATTCATTCGCATATCTTCAAGGGACATATCTTAAGCCACATGTAGCTATTCTCGATGGAATAACAATGGGATGTGGAGCTGGAATTTCTCTTCCGGGGATGTATCGTGTGGTTACTGATAAAACTATTTTTTCACACCCAGAGGCTCAAATAGGTTTCCACCCTGATTCAGGAGCTTCTTATTATTTATCTCGTTTACCTGGATACCTAGGGGAATACTTGGCCCTTACAGGAGATAAGCTAAATGGTGTAGAAATGATTGCTTGTCACCTTGCTACTCACTTTACACTAAATGCGAGGCTTCCTTGGCTTGAAGAACGCCTAGGAAAATTGATCACAGATGATCCTTCTATTGTGGAGACATCTCTTGCCCAGTATGGAGATATTGTTTACCCAGACAAAAGCAGTGTCCTTCACAAGATTGATACTATTGATCGATGTTTCTGTCATGATACAATGGAGGAAATTATTGAAGCTTTGGCCAAGGAAGCAGCTGAGTCTTATGATGAATGGTGTATATCAACTCTTAGGAAGATTAGAGAAGCATCTCCATTGAGTTTGAAAATTACTTTAGAATCTATACGTGAAGGTAGATTTGAAACACTAGATCAATGTCTGGCACGTGAGTACCGGATATCCCTTCGTGGAATTTCCAAGCAGTTCTCCTCTGATTTCTTTGAGGGTGTTAGAGCAAGAATGGTTGATAAAGATTTTACCCCCAAGTGGGATCCACCTAGTTTAAAGGATGTATCAGATGACATGGTTCAATCATATTTCTCTCCGTTCAGCGAAGTAGAGTCTGAACTGGTATTACCGACGGCATTGCGAGAACCTTACATGTGA 1458 0.4108 KNTKQVKKKKLKANELVANKKRSFSFYLPTRLFETRPESAAPSFSNSLSVSIFSFSLTEQTSNTFSAQNSRDISFENMQRLKTLLPEKCRFSLRTLCSHPRAFSAQVHHHIDDDHDDPQRQILVEGRAKSRAAILNRPSSLNALTTSMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVVRLYNSLNEGNVEEAEQFLRTLYSFAYLQGTYLKPHVAILDGITMGCGAGISLPGMYRVVTDKTIFSHPEAQIGFHPDSGASYYLSRLPGYLGEYLALTGDKLNGVEMIACHLATHFTLNARLPWLEERLGKLITDDPSIVETSLAQYGDIVYPDKSSVLHKIDTIDRCFCHDTMEEIIEALAKEAAESYDEWCISTLRKIREASPLSLKITLESIREGRFETLDQCLAREYRISLRGISKQFSSDFFEGVRARMVDKDFTPKWDPPSLKDVSDDMVQSYFSPFSEVESELVLPTALREPYM* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3731 485 Gene3D - 116 479 - -
Amo16g3731 485 Pfam Enoyl-CoA hydratase/isomerase 132 464 IPR045004 -
Amo16g3731 485 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 112 485 - -
Amo16g3731 485 CDD crotonase-like 135 299 - -
Amo16g3731 485 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 112 485 IPR032259 GO:0003860
Amo16g3731 485 SUPERFAMILY ClpP/crotonase 133 450 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3731 Amo-Chr16 148680342 148685743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g3731 98 484 Acyl Lipid Metabolism Gene Families AT4G31810 70.769 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3731 K05605 - gmx:100808892 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3731 16 148680342 148685743 Amo16g3731 16 148680342 148685743 ECH