Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3730 ATGGGAATGGTGAAAGCAGAAGAATTAAGTCTTGAATCTGTGAAGGGGAAGGTGTATACTCTGGATTCAGTGAGGGAAGCTTTGATCAGGCAAGAAGATACAATTGTCTTTGGCCTCATTGAGAGAGCAAAGTTCCTAATGAATTCTCGCACCTACGGCCGCGAGGAGATTCCGGGATTCGCTGGTTCATTGGCTGAGTTTGTTGTGAAGAATACAGAAGCAGTTCAAGCTAAGGTTGGAAGATACAATAACCCTGAAGAAAATCCTTTCTTCCCGGAAAATCTGCCACCCTCACTTGTGCCATCTTACTCCTTCACACAGTTTTTACATCCCAAAGCTGCTTCGATTAACATAAACAAATCCATCTGGAAAATCTACTTTGATGAGCTGCTTCCTTCGTTTGTTGCTTCTGGTGATGACGGCAACTATGCGCAAACCGCAGCTAGTGATCTTTCCTTGTTGCAGGCCATCTCTAGAAGGATTCATTATGGAAAATTTGTTGCTGAAGTGAAATTCAGGGAGTCTGCTCAACAATATGAGTCTCTGATTCGCGCCGAGGATAAAGGAGGATTGATGAAATTGTTGACATTTGAGAGTGTAGAAGAAACGGTGAGGAAGAGGGTTGAAAAGAAAGCTATGGTATTCGGACAGAATGTGACCCTCAACAATGGTGATGATAAAAATGTAACATACAAGGTTGATCCATCAGTGGCTGCCAACTTATACAAGAATTGGATAATACCTCTTACTAAGGATGTTCAAGTTGAGTACCTATTGCACCGTCTTGATTGA 792 0.423 MGMVKAEELSLESVKGKVYTLDSVREALIRQEDTIVFGLIERAKFLMNSRTYGREEIPGFAGSLAEFVVKNTEAVQAKVGRYNNPEENPFFPENLPPSLVPSYSFTQFLHPKAASININKSIWKIYFDELLPSFVASGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFRESAQQYESLIRAEDKGGLMKLLTFESVEETVRKRVEKKAMVFGQNVTLNNGDDKNVTYKVDPSVAANLYKNWIIPLTKDVQVEYLLHRLD* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3730 263 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 14 263 IPR037039 GO:0004106|GO:0009073
Amo16g3730 263 SUPERFAMILY Chorismate mutase II 17 263 IPR036263 GO:0046417
Amo16g3730 263 PIRSF Chor_mut_AroQ_eu 8 263 IPR008238 GO:0004106|GO:0009073
Amo16g3730 263 ProSiteProfiles Chorismate mutase domain profile. 12 263 IPR008238 GO:0004106|GO:0009073
Amo16g3730 263 PANTHER CHORISMATE MUTASE 15 263 - -
Amo16g3730 263 TIGRFAM CM_pl-yst: chorismate mutase 20 263 IPR008238 GO:0004106|GO:0009073
Amo16g3730 263 PANTHER CHORISMATE MUTASE 15 263 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3730 Amo-Chr16 148675933 148679166 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3730 K01850 - gmx:100791341 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3730 16 148675933 148679166 Amo16g3730 16 148675933 148679166 ECH