Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3720 AACAAGCTTTTAAATAAAATTTTAATTTGTAATAGATTAATTTTTGATGTATCAGTTTCATTCACGCTCTTGTATAGTTTGGTTAGTTTTCATCCTGTAATGAGAAATAGCATTGCCATTGCGGTTCCTTTGAGATTGAGACCAAACATTAGCAACACTCTACCACATCACAAGRTCCGGCCAACCTGCTTTCACAGCCATGAAGGACATACCATTAGTTGCGTCCCCTACGCCCCTCCTCAAACAAAGCCCATGGCGCTTCATTTCGAGATTCTTGGCCGGTTCATTCGTGCTCGTGCAGCTCAATTGACCCTCCCTCACTTTGTGTGTCAAACACCATTATTTATGCCAGTGGGTACTCAAGGCTTGACAAATAATGAACTTGAGAGAATTGGTTGCCAAATAATTCTGGGAAACACATATCACTTGGCCCTTCGACCTACTTCCGAGCTTCTCGAAGAAGCTGGTGGTCTTCACAATTTTATGAACTGGCCACGGGCTATGCTTACAGACTCTGGTGGCTTTCAAATGGTCTCATTGTTGCATCTTGCTGATATCACAGAAGAAGGTGTGACATTTCAGTCACCGGTGGATGGCAAGCCAATGCTTCTTACACCCGAAGAATCAATTCAGATACAAAATAGAATTGGAGCAGATGTTATTATGGATTTGGATGATGTCGTAAAGACCACCATTACTGGTCCAAGAATTGAGGAAGCTATGTATCAAACGCTTAGATGGATAGACAGATGCATAGCAGCGCACAAGAGACCTCACGATCAGAACTTGTTTGGTATTGTACAAGGTGGTTTAGATCCTGAGTTGAGGGACATCTGTGTCAAAGGTTTGGTAGACCGCAACTTGCCTGGCTATGCTATTGGTGGTCTTGCAGGAGGCGAAGATAAAGATTCATTTTGGCAAGTTGTTGCTCAGTGCACTACTGCTTTGCCAGAGGATAAACCCCATTACTTTGATATACATTTCAAATTAAATCAATTTCATACCATTTGCTTGTACTTGTTCCAGGGAGTTGGTTATCCACTTGATATTGTTGTTTGTAGTGCTTTGGGTGCAGACATGTATGATTGTGTCTACCCCACCCGMACAGCACGTTTTGGGACTGCCCTTATTCCTGAGGGAGTACTAAAACTAAAACATAGAACCACGGCTGATGATACTCGACCAATTGATCTACCTGCCCTTGTTTGCAAGAACTACACCAAGGCCTACATCCATTGCCTTGTCACTAAAGACGCCATGGGGTCTCAGCTTCTATCATATCATAATTTATATTACATGATGCCGCTTAGCAGGAATTTACACACATCAATAGTTGAGGGAAGGTTCCCAATGTTTGTATGTGACTTTTTACAAACAATGTTCCCCAAAGGTGATGTTCCTGAATGGGTCTGCAATGCTATGGAGGTGGCCGGAATCGACATTGCTTCCTGCTGTGCTCCATTTCCATCATGCCAAGAAAAATATTCCAGCAATGAAATCGGAACTAATCGATTTGATAAGGTCAAAATTGAAATTTAA 1539 0.4211 NKLLNKILICNRLIFDVSVSFTLLYSLVSFHPVMRNSIAIAVPLRLRPNISNTLPHHKXRPTCFHSHEGHTISCVPYAPPQTKPMALHFEILGRFIRARAAQLTLPHFVCQTPLFMPVGTQGLTNNELERIGCQIILGNTYHLALRPTSELLEEAGGLHNFMNWPRAMLTDSGGFQMVSLLHLADITEEGVTFQSPVDGKPMLLTPEESIQIQNRIGADVIMDLDDVVKTTITGPRIEEAMYQTLRWIDRCIAAHKRPHDQNLFGIVQGGLDPELRDICVKGLVDRNLPGYAIGGLAGGEDKDSFWQVVAQCTTALPEDKPHYFDIHFKLNQFHTICLYLFQGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALIPEGVLKLKHRTTADDTRPIDLPALVCKNYTKAYIHCLVTKDAMGSQLLSYHNLYYMMPLSRNLHTSIVEGRFPMFVCDFLQTMFPKGDVPEWVCNAMEVAGIDIASCCAPFPSCQEKYSSNEIGTNRFDKVKIEI* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3720 512 Hamap Queuine tRNA-ribosyltransferase [tgt]. 87 459 IPR004803 GO:0008479|GO:0101030
Amo16g3720 512 Pfam Queuine tRNA-ribosyltransferase 98 460 IPR002616 GO:0006400|GO:0016763
Amo16g3720 512 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 92 459 IPR004803 GO:0008479|GO:0101030
Amo16g3720 512 SUPERFAMILY tRNA-guanine transglycosylase 85 459 IPR036511 GO:0006400|GO:0016763
Amo16g3720 512 Gene3D - 84 462 IPR036511 GO:0006400|GO:0016763
Amo16g3720 512 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 82 484 - -
Amo16g3720 512 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 89 459 IPR002616 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3720 Amo-Chr16 148458664 148466460 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3720 K00777 - gmx:100819664 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3720 16 148458664 148466460 Amo16g3720 16 148458664 148466460 ECH