Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3687 ATGGAACCGGAAGTGAGCATCGAGGGCTCCGCCATGATCCAGGTGGCGGTTCTCCCAATCGGTCCGGTCCCCCCTAACTCCCTGCGCGACTATTATTCCATGCTCCTGCCACTCCACACGATCCCTCTCTCCGCAATCAGATCCTTCTACACCGAGCACCAGAAATCCCCCTTCGCTAACCAGCCATGGGACTCCGGTTTCATTCGCTTCAAATTCGTTCTCGGCGGCAACTCTCCGTCTCCGTGGGAGGACTTTCAGTCACACCGCAAGACCCTCGCCGTCGTCGGACTCTGCCATTGCCCTTCCTCCCCTGATCTCGACTCAGTCATTGATCAATTCAACGCTTCTTGTAGGTCCTACTCTTCTTCCCTTGTGCATCGTTGCTTCGCCTTCTGCCCCAACGATTCCCAGCTTGAGGAAGGAGGAAGGCAAGGGGGGAATTTGAGGTTGTTTCCACCTGCGGATCGTCCAACATTGGAGTTTCACCTCCACACTATGATGCAGGAAATAGCAGCATCACTGCTTATGGAATTTGAGAAATGGGTGCTACAGGCGGAGTCTTCTGGAACCATTCTCAAGACACCACTGGATTCTCAAGCCGGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGCGGAGACTTGGACGTGCACAGAAGACAATCGGTGACTACTGCTTGTTGGCTGGATCCCCAGTTGATGCTAATGCTCATTATTCTACGGCATTGGAACTTTGTAGGTTGACTGGGGATTACTTCTGGTATGCTGGAGCATTGGAGGGTAGCGTTTGTGCCTTGCTGATTGACCGTATGGGCCAGAAAGATTCAGTGGTTGAGGAGGAAGTTAGATATCGTTATAATAGTGTCATCTTGAATTACAAGAAGTCACAAGATAATACTCAACGAGTTTCTCCCATAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTCCTTTGCAGGAGAGAGTTGGCCAAGGAGGTGGTTGAGTTGTTGACCACTGCTGCCGATGGTGCTAAATCTTTAATTGATGCAAGTGATAGACTTGTATTATATATTGAAATTGCTCGTTTGTATGGTAATCTTGGGTACCAGAGAAAAGCTGCTTTCTTTTCTAGGCAGGTTGCTCAGTTATATCTTCAGCAAGAAAATCGATTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACAACAAAAGCGTATCATGTTCAAAGTAGATCCTCAATATCAGATCATTCTCAGAAAAATAAGGGAAACGGAGATGGTGGGAAAACTTATCACCAATCAGCAGTTTCATTATTCGAGTCTCAATGGAGTACCCTCCAGATGGTTGTGCTGAGAGAAATTCTGCTCTCTGCAGTTCGTGCTGGAGATCCTCTTACAGCATGGAGTGCTGCAGCCCGACTTCTCAGACACTACTATCCTCTAATAACTCCTGCTGGTCAAAATGGCCTTGCAAATGCCCTTTCAAATTCAGCAGATAGGCTGCCACCAGGGACACGATGTGCTGATCCTGCTTTACCTTTTATAAGGTTGCATTCTTTTCCGCTCCTCCCGATACAAATGGACATTGTAAAACGGAATCCATCTAGACCAGACTGGTGGGCAGGTTCTGCTCCTTCAGGTCCATTCATTTATACACCCTTCAGTAAAGGAGATCCAATCAATGTCAAGAAGCAAGAACTTATCTGGGTTGTTGGAGAACCTATCCAGGTCATGGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGGGTTGATAGCATATACCTATCTGTTCATTCAGGAAACTTAGATGCTTTTCCCATGAGTGTAAAACTCTTGCCAAATTCATCGAAAGTGATCACCTTATCAGGCATTCCAACATCAGTGGGGCCGGTTACAATTCCTGGGTGCATTGTTCATTGTTTTGGTGTTATTACTGAGCATCTTTTTAAAGAGGTTGACAATCTGCTTCTTGGGGCCACCCAAGGGCTTGTCCTTTCTGACCCTTTCCGATCTTGTGGATCTCCAAAGTTGAAGAATGTAACAGTTCCAAATATTTCTGTAGTTCCACCACTTCCGTTGCTGATATCACGTGTTGTTGGAGGTGATGGTGCCATCATTTTATATGAAGGTGAAATTCGTGATATATGGATAAGTCTGGCTAATGCAGGCACAGTTGCAATTGAGCAGGCGCATATTTCACTGTCAGGGAAAAATCAAGATTCTGTGATTTCATATTCTAGTGAGACTTTAAAATCTTGCCTCCCTCTAAAGCCTGGTGCTGAAGTGACAATTCGTGTGACCTTGCGAGCCTGGCAGGTTGGATCAGTGGATGTTGATGCTGGTGCTGGGAAGGCTGTCTCTGGAAGCAATGTGAGGCACATCAAAGATGGAAGCAGTCCATCACTTATGATCCACTATGCTGGACCACTTCAAACCACTGGAGATACTCCACCAAATACATCTACTGTGCCCCCTGGCAGACGCCTTGTTGTTCCCCTGCAGATTTGTGTTTTGCAGGGTTTGTCTTTCGTAAAGGCTCAGCTTCTTTCAATGGAATTTCCTGCCCATGTCGGTGAAAATCTTCCCAAGGTTGATGATCTAGATTCCACAGGACATTTTGACTCTACAACAAACATGGACAAATTGGTGAAGATAAATCCTTCCAGAGGAAGTTGGGGACTGAGATTTCTCGAACTCGAGTTATCTAATCCAACTGACATTGCGTTTGAAATCAATGTCTCCATCAAACTAGACAAATCTAGCAACGAGGGAAATCATTCTGCTGATCAGGATGCTGCTGAACACAGCTATCCTAAGACAAGAATCGATAGGGATTGCTCGGCAAGGGTTCTAGTGCCACTCAAGCATTTCAAATTACCTGTTCTTGATGATTCCTTTTTCATGAGGGACAATCAGGCAGATGGCAGAAGCACACCCTTCTCTCAAAAGAACACAAAAGCCGAGCTCAATGCTTGTATCAAGAGCCTTATCTCCAGGATCAAGGTTCGGTGGCATTCGGGACGCAATAGCTCTGGCGAGTTGAATACCAAGGACGCGATCCAGGCGGCATTGCAGACATCAATCATGGATGTCCTGCTGCCAGATCCACTGACTTTCATGTTCAGGCTCACTGGACATGATGTTGAATCAGAAAAACCTGATTCTGATAAAGAATCTAATATCGGCGAATCTTCTGCTTCCAGAGGTTCAGTCATTGCACATGAAATGACGCCAATGGAGGTTCTGGTTCGTAATAACACAAAGGATATGATCAAAATCAATTTAAATATTACATGCAGAGATGTAGCTGGGGAGAATTGTGTCGATGGAACCAAAGCAACTGTTTTATGGACGGGTGTTCTAAGTGACATCAGTGTGGAAATTCCCCCGCTTCAACAAATCAAACATTCTTTCTGCTTGCATTTTCTTGTCCCGGGAGAGTACACGCTATTAGCCGCAGCAGTGATTGATAATCCAAGCGACATTCTACGTGCTCGTGCAAAGGCCACCTCACCATCCGAGCCAATTTTCTGCCGGGGACCACCGTATCACGTTCGTGTTCACGGAACTGCTTGA 3570 0.4591 MEPEVSIEGSAMIQVAVLPIGPVPPNSLRDYYSMLLPLHTIPLSAIRSFYTEHQKSPFANQPWDSGFIRFKFVLGGNSPSPWEDFQSHRKTLAVVGLCHCPSSPDLDSVIDQFNASCRSYSSSLVHRCFAFCPNDSQLEEGGRQGGNLRLFPPADRPTLEFHLHTMMQEIAASLLMEFEKWVLQAESSGTILKTPLDSQAGLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELCRLTGDYFWYAGALEGSVCALLIDRMGQKDSVVEEEVRYRYNSVILNYKKSQDNTQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLVLYIEIARLYGNLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSISDHSQKNKGNGDGGKTYHQSAVSLFESQWSTLQMVVLREILLSAVRAGDPLTAWSAAARLLRHYYPLITPAGQNGLANALSNSADRLPPGTRCADPALPFIRLHSFPLLPIQMDIVKRNPSRPDWWAGSAPSGPFIYTPFSKGDPINVKKQELIWVVGEPIQVMVELANPCGFDLRVDSIYLSVHSGNLDAFPMSVKLLPNSSKVITLSGIPTSVGPVTIPGCIVHCFGVITEHLFKEVDNLLLGATQGLVLSDPFRSCGSPKLKNVTVPNISVVPPLPLLISRVVGGDGAIILYEGEIRDIWISLANAGTVAIEQAHISLSGKNQDSVISYSSETLKSCLPLKPGAEVTIRVTLRAWQVGSVDVDAGAGKAVSGSNVRHIKDGSSPSLMIHYAGPLQTTGDTPPNTSTVPPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVGENLPKVDDLDSTGHFDSTTNMDKLVKINPSRGSWGLRFLELELSNPTDIAFEINVSIKLDKSSNEGNHSADQDAAEHSYPKTRIDRDCSARVLVPLKHFKLPVLDDSFFMRDNQADGRSTPFSQKNTKAELNACIKSLISRIKVRWHSGRNSSGELNTKDAIQAALQTSIMDVLLPDPLTFMFRLTGHDVESEKPDSDKESNIGESSASRGSVIAHEMTPMEVLVRNNTKDMIKINLNITCRDVAGENCVDGTKATVLWTGVLSDISVEIPPLQQIKHSFCLHFLVPGEYTLLAAAVIDNPSDILRARAKATSPSEPIFCRGPPYHVRVHGTA* 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3687 1189 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 188 IPR013935 -
Amo16g3687 1189 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 276 IPR013935 -
Amo16g3687 1189 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 738 IPR013935 -
Amo16g3687 1189 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1188 - -
Amo16g3687 1189 MobiDBLite consensus disorder prediction 918 937 - -
Amo16g3687 1189 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1188 IPR013935 -
Amo16g3687 1189 MobiDBLite consensus disorder prediction 920 937 - -
Amo16g3687 1189 MobiDBLite consensus disorder prediction 1046 1067 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3687 Amo-Chr16 147841210 147848756 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3687 K20306 - gmx:100784850 2068.89