Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g3660 ATGAATATTCGATGCAGTTTTTTCTTCGCTGCACCTCTCTCTCTTCTCGCCTTCTTCTTCCTCATTCTTCTAATTCTTCACGGTCACTTCTTCCAATTCGTCACCACCTTCTCCGCCGCCTCCACCACCGGATTTTCCGTTCCAACGGATCGTCTCCGAACCAAATTTTTCGGCGAGAATCATCCGCACTTCGCCGTCGGAGCCACCGGCGTTATTCATCAGAAAAATACCGCAGAACGAACTGCCACGAGGAGAGTGAGAAAAGTTGAAGAAGAGCTGGCGGGAGCTCGAGCTTCGATACGAAAGGCGGCGGCAGCAGCATCGGACGAAGATATTGAGAGAAGCAATTGCACTTTTGCAACCACCGTAGGTAACGGAGATGGCGGATTTGACGACGGCGGCGACCACTACATTCCCGCCGGAGATGTGTATCGTAACTCCCGCCTATTTTACCGGAGCTACTTGGAGATGGAGAAAATGTTCAAGATATACGTATACCAAGATGGTGAACTTCCAATAACTCATGATGGCCCGTGCAAGGACATATACTCAATTGAAGGAAGGTTCATCCAAGAGCTAGAGCATGGTGTACGTGGAGGGAAGTTTAGGACACATGACCCCAATTTGGCTCATGTTTACTTCTTCCCATTCAGTGTGACTTGGATGGTGAAGTACCTCTACACTCCATTGTCTTACAATCTCACTCCTTTAAAGCAGTTTGTCTCTGATTATGTCAGAGTGGTCTCTACAAAGTACCCCTTTTGGAATAGAACTCTTGGTGCTGACCACTTCATGCTTGCTTGTCATGATTGGGCTCCTCATGCATCAAAGGGAAATCCTTCTCTCTACCACAACTCAATCCGAGTCTTATGCAATGCCAACACTTCAGAGGGCTTCAAACCAAGAAAAGATGTATCCTTACCAGAAATTCACCTCTATGGAGGTGAAGTTTCCCCAAAACTCCTCTCACCTCCAAAAGACAACACCCCAAGAAACTACCTTGCTTTCTTTGCTGGGGGAGAACACGGCCCAATTAGGCCTATACTCCTCCACCACTGGAAAAACCTGAACAACAACAATGATGATCTTATTCGTGTGTATGAGTACCTCCCTAAGGGCATGGACTACTACTCCTTCTTGCTCAACTCAAAGTTCTGCCTTTGCCCAAGTGGGCATGAAGTTGCTAGCCCAAGAATAGTTGAGTCAATTTATGCAGAGTGTGTTCCTGTGATCATATCAGAGGGTTATGTTTTGCCCTTCAGTGATGTGCTTCGATGGGAGGCATTTTCAGTTCAGATGGATGTTTCGGATATTCCAAGGTTGAAAGATGTTCTTAGTGCAATTCCAGAGGAGAGGTATTGGAAGCTTAAGGAAGGAGTAAGGGCAGTGAGGAGACATTTCACACTTAATCAACCAGCTAAGAGATATGATGCCTTTCACATGATCTTGCACTCTATATGGCTAAGGAGATTGAATATAGAACTTAATTAA 1491 0.4588 MNIRCSFFFAAPLSLLAFFFLILLILHGHFFQFVTTFSAASTTGFSVPTDRLRTKFFGENHPHFAVGATGVIHQKNTAERTATRRVRKVEEELAGARASIRKAAAAASDEDIERSNCTFATTVGNGDGGFDDGGDHYIPAGDVYRNSRLFYRSYLEMEKMFKIYVYQDGELPITHDGPCKDIYSIEGRFIQELEHGVRGGKFRTHDPNLAHVYFFPFSVTWMVKYLYTPLSYNLTPLKQFVSDYVRVVSTKYPFWNRTLGADHFMLACHDWAPHASKGNPSLYHNSIRVLCNANTSEGFKPRKDVSLPEIHLYGGEVSPKLLSPPKDNTPRNYLAFFAGGEHGPIRPILLHHWKNLNNNNDDLIRVYEYLPKGMDYYSFLLNSKFCLCPSGHEVASPRIVESIYAECVPVIISEGYVLPFSDVLRWEAFSVQMDVSDIPRLKDVLSAIPEERYWKLKEGVRAVRRHFTLNQPAKRYDAFHMILHSIWLRRLNIELN* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g3660 496 Coils Coil 86 106 - -
Amo16g3660 496 Pfam Exostosin family 158 447 IPR040911 -
Amo16g3660 496 PANTHER EXOSTOSIN FAMILY PROTEIN 66 495 - -
Amo16g3660 496 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 66 495 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g3660 Amo-Chr16 147415904 147421593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g3660 - - adu:107495288 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3660 16 147415904 147421593 Amo16g3660 16 147415904 147421593 ECH
Amo16g3660 16 147415904 147421593 Amo06g2837 06 93749498 93754830 hybridization